Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_J01
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003654-1|AAO39658.1| 1273|Drosophila melanogaster AT04875p pro...    29   5.2  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   9.1  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   9.1  

>BT003654-1|AAO39658.1| 1273|Drosophila melanogaster AT04875p
           protein.
          Length = 1273

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 227 PHAPHHALRS-HDHSGSGVRSQVLXRLEMR 313
           PHA HH++R+ H H+GS + S  L + ++R
Sbjct: 124 PHAHHHSMRNGHQHNGS-ISSGTLQKQDLR 152


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 15/60 (25%), Positives = 17/60 (28%)
 Frame = +3

Query: 573 PXXPXPAXSALPXXAXLFRPPLXXXXQXXXSXXPXXXRPPXXXXXPXXPXXXXPXPPPTP 752
           P  P P     P     + PP     +      P    PP     P       P P PTP
Sbjct: 76  PPPPPPPQPTPPAPRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTP 135



 Score = 28.7 bits (61), Expect = 9.1
 Identities = 18/64 (28%), Positives = 22/64 (34%)
 Frame = +3

Query: 561 PXXXPXXPXPAXSALPXXAXLFRPPLXXXXQXXXSXXPXXXRPPXXXXXPXXPXXXXPXP 740
           P   P  P P+  A P  +  + PP     +      P    PP     P  P    P P
Sbjct: 100 PPRPPPQPTPSAPAPPPPS--YGPPQTPPPRPPPQPTPSAPAPPPSYGPPQTP---PPRP 154

Query: 741 PPTP 752
           PP P
Sbjct: 155 PPQP 158


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 15/60 (25%), Positives = 17/60 (28%)
 Frame = +3

Query: 573 PXXPXPAXSALPXXAXLFRPPLXXXXQXXXSXXPXXXRPPXXXXXPXXPXXXXPXPPPTP 752
           P  P P     P     + PP     +      P    PP     P       P P PTP
Sbjct: 76  PPPPPPPQPTPPAPRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTP 135



 Score = 28.7 bits (61), Expect = 9.1
 Identities = 18/64 (28%), Positives = 22/64 (34%)
 Frame = +3

Query: 561 PXXXPXXPXPAXSALPXXAXLFRPPLXXXXQXXXSXXPXXXRPPXXXXXPXXPXXXXPXP 740
           P   P  P P+  A P  +  + PP     +      P    PP     P  P    P P
Sbjct: 100 PPRPPPQPTPSAPAPPPPS--YGPPQTPPPRPPPQPTPSAPAPPPSYGPPQTP---PPRP 154

Query: 741 PPTP 752
           PP P
Sbjct: 155 PPQP 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,750,883
Number of Sequences: 53049
Number of extensions: 202681
Number of successful extensions: 881
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)