Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_I14
         (1068 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    31   1.1  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    31   1.1  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    31   1.1  
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    29   5.7  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = +2

Query: 671 GGKKXPPPXPXXXXPPLXFFFXKKXPPPXXFXGGGGPP 784
           GG   PPP P    PP         PPP  F GG  PP
Sbjct: 756 GGPPPPPPPPGGCPPP------PPPPPPGGFKGGPPPP 787


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = +2

Query: 671 GGKKXPPPXPXXXXPPLXFFFXKKXPPPXXFXGGGGPP 784
           GG   PPP P    PP         PPP  F GG  PP
Sbjct: 756 GGPPPPPPPPGGCPPP------PPPPPPGGFKGGPPPP 787


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = +2

Query: 671 GGKKXPPPXPXXXXPPLXFFFXKKXPPPXXFXGGGGPP 784
           GG   PPP P    PP         PPP  F GG  PP
Sbjct: 339 GGPPPPPPPPGGCPPP------PPPPPPGGFKGGPPPP 370


>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +2

Query: 686 PPPXPXXXXPPLXFFFXKKXPPPXXFXGGGGPP 784
           PPP P     PL        PPP      GGPP
Sbjct: 520 PPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPP 552


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +3

Query: 687 PPPXPXXXPPPFXFFLXKKXPPXXFFXGGGXPP 785
           PPP P   PPP   F     PP      GG PP
Sbjct: 76  PPPGPGGIPPPPPMFAGGIPPPPPMM--GGIPP 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,866,766
Number of Sequences: 27780
Number of extensions: 173161
Number of successful extensions: 447
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2856190974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)