Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_I11
(817 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 45 1e-05
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.016
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.021
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.048
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.15
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.15
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 31 0.20
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 30 0.45
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 1.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.8
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 5.6
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 26 5.6
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 26 7.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 9.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 44.8 bits (101), Expect = 1e-05
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -3
Query: 800 APPPPXXXPPHAXXPXPXXXXHPKPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
+PPPP PP P P P PPP P PP PPPPPP
Sbjct: 731 SPPPP---PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 35.5 bits (78), Expect = 0.009
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 810 PXXXXPPTXXXTPTRXKXPXPXXXPPKTXPXPGPEXXXXPPPRAXXXXPPTPPPP 646
P P TP P P P P P P PPP PP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP-----PPPGVAGAGPPPPPPP 781
Score = 30.3 bits (65), Expect = 0.34
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -2
Query: 795 PPTXXXTPTRXKXPXPXXXPPKTXPXPGPEXXXXPP--PRAXXXXPPTPPPPXXXG 634
PP PT P P PP GP PP A PP PPP G
Sbjct: 735 PPPAVIVPT--PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -1
Query: 796 PPHPXXXPHTPXXPXPXKXXTQNXPPPXPRXXXXPXPQSXPXXP-PNPPPPXP 641
PP P TP P P PPP P P P P PPPP P
Sbjct: 734 PPPPAVIVPTPA-PAPIPV-----PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.016
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -1
Query: 796 PPHPXXXPHT-PXXPXPXKXXTQNXPPPXPRXXXXPXPQSXPXXPPN-PPPPXP 641
P HP P P P + PPP P P PP+ PPPP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.45
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXHPKPPPXXAQXTPXXXPP 684
PPP PP + P P PPP A P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 29.5 bits (63), Expect = 0.60
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = -2
Query: 792 PTXXXTPTRXKXPXPXXXPPKTXPXPGPEXXXXPPPRAXXXXPPTPPP 649
P PT P PP P P PPP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/55 (23%), Positives = 17/55 (30%)
Frame = -2
Query: 810 PXXXXPPTXXXTPTRXKXPXPXXXPPKTXPXPGPEXXXXPPPRAXXXXPPTPPPP 646
P PP P P PP + PP ++ P+P PP
Sbjct: 1481 PVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPP 1535
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = -3
Query: 797 PP--PPXXXPPHAXXPXPXXXXHPKPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
PP P PP P P PPP A P P PPPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP-------SAPPPPLP 1736
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.021
Identities = 32/128 (25%), Positives = 34/128 (26%), Gaps = 4/128 (3%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXH--PKPPPXXAQXTPXXXPP-EXXXXXPQPP-PPPPXXXT 630
PPPP P P P PPP A T PP PP PPP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 629 XXXXXXXXXXXXXPLXPXDPXASXSXXGXPPRDPXLRXXTXPPGXPXXSI*XQXSRXEPP 450
P P PP P + P G P + PP
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 449 GXPGQPXA 426
G P A
Sbjct: 459 LPAGMPAA 466
Score = 33.1 bits (72), Expect = 0.048
Identities = 26/108 (24%), Positives = 29/108 (26%), Gaps = 2/108 (1%)
Frame = -2
Query: 810 PXXXXPPTXXXTPTRXKXPXPXXXPPKTXPXPGPEXXXXPPP--RAXXXXPPTPPPPXXX 637
P PP + P PP P P PPP + P PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 636 GHXXXXXXXXXXXXXXXXPXGPXRLXLXXRXPPPGPPTTXXXXPPGXP 493
G P P L PP PP+ P G P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Score = 29.1 bits (62), Expect = 0.79
Identities = 23/102 (22%), Positives = 27/102 (26%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXHPKPPPXXAQXTPXXXPPEXXXXXPQPPPPPPXXXTXXXX 618
PPP A P PP + P P PPPPP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Query: 617 XXXXXXXXXPLXPXDPXASXSXXGXPPRDPXLRXXTXPPGXP 492
P P ++ S PP R + PP P
Sbjct: 353 LPPQGRSAP--PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 28.7 bits (61), Expect = 1.0
Identities = 32/134 (23%), Positives = 37/134 (27%), Gaps = 7/134 (5%)
Frame = -1
Query: 808 TXXXPPHPXXXPHTPXXPXPXKXXTQNXPPPXPRXXXXPXPQSXPXXPPNPPPPXPKXXX 629
T PP+ P P P T P P P + P PPPP +
Sbjct: 263 TVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNR 322
Query: 628 XXXXXXXXXXXXXPXPXXTXXPXPPXKXA------PPGTPXYEXXPTPRVXPXXXYXGRX 467
P P PP A PP P PR P
Sbjct: 323 GKPPIGNGSSNSSLPP----PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Query: 466 RVSSR-LEXPGSPP 428
SSR + P +PP
Sbjct: 379 LSSSRAVSNPPAPP 392
Score = 26.2 bits (55), Expect = 5.6
Identities = 23/102 (22%), Positives = 29/102 (28%), Gaps = 2/102 (1%)
Frame = -3
Query: 800 APP--PPXXXPPHAXXPXPXXXXHPKPPPXXAQXTPXXXPPEXXXXXPQPPPPPPXXXTX 627
+PP PP P + P P PP ++ + PPPPP
Sbjct: 266 SPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPP---PPPPPSRRNR 322
Query: 626 XXXXXXXXXXXXPLXPXDPXASXSXXGXPPRDPXLRXXTXPP 501
L P P + G P P R PP
Sbjct: 323 GKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.048
Identities = 23/91 (25%), Positives = 26/91 (28%)
Frame = -1
Query: 811 PTXXXPPHPXXXPHTPXXPXPXKXXTQNXPPPXPRXXXXPXPQSXPXXPPNPPPPXPKXX 632
P+ PP P P P + PPP P P P P P + PPP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRP----SIPPPSP-ASAPPIPSKAPPIPSSLPPPAQPAA 179
Query: 631 XXXXXXXXXXXXXXPXPXXTXXPXPPXKXAP 539
P P PP AP
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 31.9 bits (69), Expect = 0.11
Identities = 26/105 (24%), Positives = 30/105 (28%), Gaps = 3/105 (2%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXHPKP-PPXXAQXTPXXXPPEXXXXXPQPP--PPPPXXXTX 627
PP P PP P P P P +P P P PP PPPP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Query: 626 XXXXXXXXXXXXPLXPXDPXASXSXXGXPPRDPXLRXXTXPPGXP 492
P P + P R P + + PP P
Sbjct: 211 VANTSSRPSSFAPPAGHAPNVTSESPKFPNRGPSIPSASVPPVPP 255
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = -2
Query: 795 PPTXXXTPTRXKXPXPXXXPPKTXPXPGPEXXXXPP-PRAXXXXPPTPPPP 646
PP+ PT P P P P PP P P + PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -3
Query: 776 PPHAXXPXPXXXXHPKPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
PP A P P PP A P PP P P PP
Sbjct: 124 PPSA--PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXHP----KPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
PPPP P P P P PPP + PP + PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXHP----KPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
PPPP P P P P PPP + PP + PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXHP----KPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
PPPP P P P P PPP + PP + PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXHP----KPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
PPPP P P P P PPP + PP + PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXHP----KPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
PPPP P P P P PPP + PP + PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXHP----KPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
PPPP P P P P PPP + PP + PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXHP----KPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
PPPP P P P P PPP + PP + PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/53 (30%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Frame = -1
Query: 796 PPHPXXXPHTPXXPXPXKXXTQNXPPP---XPRXXXXPXPQSXPXXPPNPPPP 647
P H H P P K PPP P P P PPPP
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/53 (28%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Frame = -1
Query: 796 PPHPXXXPHTPXXPXPXKXXTQNXPPP---XPRXXXXPXPQSXPXXPPNPPPP 647
P H H P P + PPP P P P PPPP
Sbjct: 211 PMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/53 (28%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Frame = -1
Query: 796 PPHPXXXPHTPXXPXPXKXXTQNXPPP---XPRXXXXPXPQSXPXXPPNPPPP 647
P H H P P + PPP P P P PPPP
Sbjct: 224 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/53 (28%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Frame = -1
Query: 796 PPHPXXXPHTPXXPXPXKXXTQNXPPP---XPRXXXXPXPQSXPXXPPNPPPP 647
P H H P P + PPP P P P PPPP
Sbjct: 237 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/53 (28%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Frame = -1
Query: 796 PPHPXXXPHTPXXPXPXKXXTQNXPPP---XPRXXXXPXPQSXPXXPPNPPPP 647
P H H P P + PPP P P P PPPP
Sbjct: 250 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/53 (28%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Frame = -1
Query: 796 PPHPXXXPHTPXXPXPXKXXTQNXPPP---XPRXXXXPXPQSXPXXPPNPPPP 647
P H H P P + PPP P P P PPPP
Sbjct: 263 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/53 (28%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Frame = -1
Query: 796 PPHPXXXPHTPXXPXPXKXXTQNXPPP---XPRXXXXPXPQSXPXXPPNPPPP 647
P H H P P + PPP P P P PPPP
Sbjct: 276 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/53 (28%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Frame = -1
Query: 796 PPHPXXXPHTPXXPXPXKXXTQNXPPP---XPRXXXXPXPQSXPXXPPNPPPP 647
P H H P P + PPP P P P PPPP
Sbjct: 289 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.15
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Frame = -3
Query: 791 PPXXXPPHAXXPXPXXXXHPKPPPXXAQXTPXXXPPEXXXXXPQP----PPPPP 642
PP P A P P P P A P PP P+P PP PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 31.5 bits (68), Expect = 0.15
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = -3
Query: 794 PPPXXXPPHAXXPXPXXXXHPKPPPXXAQXTP---XXXPPEXXXXXPQPPPPPP 642
PPP PP P P P PPP A P PP PP P P
Sbjct: 1192 PPPSEAPP---VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 30.7 bits (66), Expect = 0.26
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = -1
Query: 811 PTXXXPPHPXXXPHTPXXPXPXKXXTQNXPPPXPRXXXXPXPQSXPXXPPNPPPPXP 641
P+ PP P P P P PP P P PP+ PP P
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 28.7 bits (61), Expect = 1.0
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 10/63 (15%)
Frame = -1
Query: 796 PPHPXXXPHTPXXPXPX------KXXTQNXPPPXPRXXXXPXPQSXPXXPPNPP----PP 647
PP P P P P K P P P P P+ PP PP PP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 646 XPK 638
PK
Sbjct: 1200 VPK 1202
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/50 (30%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = -2
Query: 795 PPTXXXTPTRXKXPXPXXXPPKTXP-XPGPEXXXXPPPRAXXXXPPTPPP 649
PP+ + P PP T P P P P P PP P P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.1 bits (57), Expect = 3.2
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 8/65 (12%)
Frame = -1
Query: 811 PTXXXPPHPXXXPHTPXXPXPXKXXTQNXPP-PXPRXXXX-PXPQSXPXXP------PNP 656
P PP P P P P + + PP P P P P S P P P+
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLP----SADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSA 1062
Query: 655 PPPXP 641
PPP P
Sbjct: 1063 PPPVP 1067
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = -2
Query: 750 PXXXPPKTXPXPGPEXXXXPPPRAXXXXPPTPPP 649
P P P P P P P+ PP P P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/54 (25%), Positives = 14/54 (25%)
Frame = -2
Query: 810 PXXXXPPTXXXTPTRXKXPXPXXXPPKTXPXPGPEXXXXPPPRAXXXXPPTPPP 649
P P P P P P P P P P PP P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/49 (28%), Positives = 17/49 (34%)
Frame = -2
Query: 795 PPTXXXTPTRXKXPXPXXXPPKTXPXPGPEXXXXPPPRAXXXXPPTPPP 649
PP + P P PP P P P P++ P PPP
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTP-----PVPKSSSGAPSAPPP 1065
Score = 26.2 bits (55), Expect = 5.6
Identities = 29/109 (26%), Positives = 30/109 (27%), Gaps = 11/109 (10%)
Frame = -1
Query: 796 PPHPXXXPHTPXXPXPXKXXT----QNXPP-PXPRXXXXPXPQSXPXXPPNP----PPPX 644
PP P P P P PP P P P P+ PP P PP
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 643 PK-XXXXXXXXXXXXXXXXPXPXXTXXPXPPXKXAPP-GTPXYEXXPTP 503
PK P P P P APP P P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 5/59 (8%)
Frame = -2
Query: 810 PXXXXPPTXXXTPTRXKXPXPXXXPPKTXP----XPGPEXXXXPP-PRAXXXXPPTPPP 649
P PP + P P PP P P P PP P+ PP P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 31.1 bits (67), Expect = 0.20
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -1
Query: 337 RAPPPP----LRSLISNLSNTCDLTPLPEWSCERSAW 239
R+PPP +RS+ L D+TP+ +W +RS W
Sbjct: 99 RSPPPSRERSVRSIEQELEQLRDVTPINQWKRKRSLW 135
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.9 bits (64), Expect = 0.45
Identities = 23/82 (28%), Positives = 25/82 (30%), Gaps = 5/82 (6%)
Frame = -1
Query: 757 PXPXKXXTQNXPPPXPRXXXXPX-PQSXPXXPPNPP--PPXPKXXXXXXXXXXXXXXXXP 587
P P + P P P PQS P NP PP +
Sbjct: 423 PAPWAKPASSAAPSNPAPWQQPAAPQSAPALSMNPSSLPPWQQPTQQSAVQPSNLVPSQN 482
Query: 586 XPXX--TXXPXPPXKXAPPGTP 527
P T P PP APPG P
Sbjct: 483 APFIPGTSAPLPPTTFAPPGVP 504
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.7 bits (61), Expect = 1.0
Identities = 23/107 (21%), Positives = 25/107 (23%)
Frame = -1
Query: 811 PTXXXPPHPXXXPHTPXXPXPXKXXTQNXPPPXPRXXXXPXPQSXPXXPPNPPPPXPKXX 632
P+ PP P P P P P P+ P P P P P
Sbjct: 587 PSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAP----V 642
Query: 631 XXXXXXXXXXXXXXPXPXXTXXPXPPXKXAPPGTPXYEXXPTPRVXP 491
P P PP P P P V P
Sbjct: 643 VPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVP 689
Score = 28.3 bits (60), Expect = 1.4
Identities = 23/107 (21%), Positives = 25/107 (23%)
Frame = -1
Query: 811 PTXXXPPHPXXXPHTPXXPXPXKXXTQNXPPPXPRXXXXPXPQSXPXXPPNPPPPXPKXX 632
P P P P P + P P P P P P P P P
Sbjct: 536 PVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQP-PV 594
Query: 631 XXXXXXXXXXXXXXPXPXXTXXPXPPXKXAPPGTPXYEXXPTPRVXP 491
P P P + A P P P P P
Sbjct: 595 APVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAP 641
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/55 (29%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Frame = -3
Query: 794 PPPXXXPPHAXXPXPXXXXHP----KPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
PPP PP A P + P P+ P PPPPPP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPP 243
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/52 (25%), Positives = 16/52 (30%)
Frame = -3
Query: 797 PPPPXXXPPHAXXPXPXXXXHPKPPPXXAQXTPXXXPPEXXXXXPQPPPPPP 642
PPPP A + + P P + PPPPPP
Sbjct: 193 PPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPP 244
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 730 NXPPPXPRXXXXPXPQSXPXXPPNPPPP 647
N PPP P P P PP PPPP
Sbjct: 8 NPPPPPPPPGFEP-----PSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 701 PXXXPPEXXXXXPQPPPPPP 642
P PP QPPPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = -2
Query: 711 PEXXXXPPPRAXXXXPPTPPPPXXXGH 631
P PPP P PPPP G+
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPGY 32
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = -3
Query: 791 PPXXXPPHAXXPXPXXXXHPKPPPXXAQXTPXXXP 687
P P P P HP PPP + +P P
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = -2
Query: 756 PXPXXXPPKTXPXPGPEXXXXPPPRAXXXXPPTPPPP 646
P PP P P + PPP P PP P
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = -2
Query: 774 PTRXKXPXPXXXPPKTXPXPGPEXXXXPPPRAXXXXPPTPPP 649
P P P P P P PP A P PPP
Sbjct: 1035 PPTVSVPSPSALSPSVTPQLPPVSSRLPPVSATRPQIPQPPP 1076
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 26.2 bits (55), Expect = 5.6
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 648 GGGGLGGXXGXLWGXGXXXXLGXGGGXFWVXXXXGXGXXGVWGXXXGWGG 797
GGGG+GG G + G + G G G G G + G GG
Sbjct: 135 GGGGMGGGMGGMGGMDDDMDMDGGFG----TRTRGGGMPGGFANMFGGGG 180
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 328 PPPLRSLISNLSNTCDLTPLPEW 260
P P+ S ++N +L PLPEW
Sbjct: 10 PKPMDSSHIKVTNVKELKPLPEW 32
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = -3
Query: 728 PPPXXAQXTPXXXPPEXXXXXPQPPPPPPXXXT 630
PPP P PP PP PP T
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGAT 1914
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,964,907
Number of Sequences: 5004
Number of extensions: 33501
Number of successful extensions: 456
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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