Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_I11
         (817 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    28   0.090
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    25   0.63 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   1.1  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   7.8  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 28.3 bits (60), Expect = 0.090
 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
 Frame = -1

Query: 796 PPHPXXXPHTPXXPXPXKXXTQNXP-PPXPRXXXXPXPQ---SXPXXPPNPPPPXPK 638
           PPHP         P   +      P PP PR    P  +   + P   P P PP P+
Sbjct: 111 PPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPR 167



 Score = 27.5 bits (58), Expect = 0.16
 Identities = 17/59 (28%), Positives = 20/59 (33%), Gaps = 6/59 (10%)
 Frame = -1

Query: 796 PPHPXXXPHTPXXPXPXKXXTQNXP---PPXPRXXXXPXPQ---SXPXXPPNPPPPXPK 638
           PPHP           P        P   PP PR    P  +   + P   P P PP P+
Sbjct: 83  PPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPR 141


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -1

Query: 364 LVCRLQRCRRAPPPPLR--SLISNLSNTCDLTPLPEWSCERSAWWGACGRVL 215
           L   + R R   P  L   SL +N   +  LTP P W+  ++   GACG  +
Sbjct: 79  LFVTVPRWRNGIPATLTYISLDTNRGGSPKLTPYPNWAQNKA---GACGSAI 127


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 665  PQPPPPPP 642
            P+PPPPPP
Sbjct: 1857 PEPPPPPP 1864


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 665 PQPPPPPP 642
           P PPPPPP
Sbjct: 341 PAPPPPPP 348


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 665  PQPPPPPP 642
            P PPPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 662  QPPPPPP 642
            QPPPPPP
Sbjct: 1354 QPPPPPP 1360


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/26 (34%), Positives = 9/26 (34%)
 Frame = -2

Query: 723 PXPGPEXXXXPPPRAXXXXPPTPPPP 646
           P P P      P R     P   PPP
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPP 48



 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/30 (30%), Positives = 11/30 (36%)
 Frame = -3

Query: 734 PKPPPXXAQXTPXXXPPEXXXXXPQPPPPP 645
           P+P P  +   P    P      P P  PP
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
 Frame = -1

Query: 766 PXXPXPXKXXTQNXPPPXPRXXXXPXPQSXPXX--PPNPPP 650
           P    P    + +  P  P+    P P   P    PP  PP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/36 (27%), Positives = 11/36 (30%)
 Frame = -2

Query: 756 PXPXXXPPKTXPXPGPEXXXXPPPRAXXXXPPTPPP 649
           P P   P        P     PPP      PP+  P
Sbjct: 25  PSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = -1

Query: 724 PPPXPRXXXXPXPQSXPXXPPNPPPPXP 641
           PP  PR        +    PP+  PP P
Sbjct: 641 PPIMPRVQNATDTTNFDEYPPDSDPPPP 668


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,462
Number of Sequences: 438
Number of extensions: 6819
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)