Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_I06
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 2.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 2.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 2.4
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 25 2.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 4.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 4.2
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 25 4.8
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 24 7.0
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 23 8.6
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 23 9.3
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 522 GGEKKXXXXXGXXPPPPPPXXGXGKXXP 605
GG G PPPPPP G G+ P
Sbjct: 199 GGSGGSGGGSGRFPPPPPPYGGGGRRRP 226
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 552 GXXPPPPPPXXGXGKXXPP 608
G PPPPPP G K PP
Sbjct: 767 GCPPPPPPPPPGGFKGGPP 785
Score = 25.4 bits (53), Expect(2) = 2.3
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 561 PPPPPPXXGXGKXXPP 608
PPPPPP G PP
Sbjct: 771 PPPPPPPGGFKGGPPP 786
Score = 25.0 bits (52), Expect(2) = 3.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 561 PPPPPPXXGXGKXXPP 608
PPPPPP G PP
Sbjct: 772 PPPPPPGGFKGGPPPP 787
Score = 22.6 bits (46), Expect(2) = 3.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 724 GGPPPPPPP 732
Score = 22.6 bits (46), Expect(2) = 2.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 740 GGPPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 552 GXXPPPPPPXXGXGKXXPP 608
G PPPPPP G K PP
Sbjct: 767 GCPPPPPPPPPGGFKGGPP 785
Score = 25.4 bits (53), Expect(2) = 2.3
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 561 PPPPPPXXGXGKXXPP 608
PPPPPP G PP
Sbjct: 771 PPPPPPPGGFKGGPPP 786
Score = 25.0 bits (52), Expect(2) = 3.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 561 PPPPPPXXGXGKXXPP 608
PPPPPP G PP
Sbjct: 772 PPPPPPGGFKGGPPPP 787
Score = 22.6 bits (46), Expect(2) = 3.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 724 GGPPPPPPP 732
Score = 22.6 bits (46), Expect(2) = 2.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 740 GGPPPPPPP 748
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 552 GXXPPPPPPXXGXGKXXPP 608
G PPPPPP G K PP
Sbjct: 350 GCPPPPPPPPPGGFKGGPP 368
Score = 25.4 bits (53), Expect(2) = 2.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 561 PPPPPPXXGXGKXXPP 608
PPPPPP G PP
Sbjct: 354 PPPPPPPGGFKGGPPP 369
Score = 25.0 bits (52), Expect(2) = 3.1
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 561 PPPPPPXXGXGKXXPP 608
PPPPPP G PP
Sbjct: 355 PPPPPPGGFKGGPPPP 370
Score = 22.6 bits (46), Expect(2) = 3.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 307 GGPPPPPPP 315
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 323 GGPPPPPPP 331
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 25.4 bits (53), Expect(2) = 2.8
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 561 PPPPPPXXGXGK 596
PPPPPP G G+
Sbjct: 68 PPPPPPQCGCGR 79
Score = 22.6 bits (46), Expect(2) = 2.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 64 GIPPPPPPP 72
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 24.6 bits (51), Expect(2) = 4.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 561 PPPPPPXXGXG 593
PPPPPP G G
Sbjct: 651 PPPPPPPSGAG 661
Score = 22.6 bits (46), Expect(2) = 4.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 647 GAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 24.6 bits (51), Expect(2) = 4.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 561 PPPPPPXXGXG 593
PPPPPP G G
Sbjct: 477 PPPPPPPSGAG 487
Score = 22.6 bits (46), Expect(2) = 4.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 473 GAPPPPPPP 481
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 24.6 bits (51), Expect(2) = 4.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 561 PPPPPPXXGXG 593
PPPPPP G G
Sbjct: 55 PPPPPPMCGCG 65
Score = 22.6 bits (46), Expect(2) = 4.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 48 GCAPPPPPP 56
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 561 PPPPPPXXGXGKXXPP 608
PPPPPP G G PP
Sbjct: 40 PPPPPPPCGGGYEAPP 55
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 23.8 bits (49), Expect(2) = 7.0
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 561 PPPPPPXXGXGKXXP 605
PPPPPP G+ P
Sbjct: 6 PPPPPPLLPSGEILP 20
Score = 22.6 bits (46), Expect(2) = 7.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 2 GPPPPPPPP 10
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 23.4 bits (48), Expect(2) = 8.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 561 PPPPPPXXGXGKXXPP 608
PPPPPP PP
Sbjct: 1015 PPPPPPADFFANIAPP 1030
Score = 22.6 bits (46), Expect(2) = 8.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 1011 GPPPPPPPP 1019
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 561 PPPPPPXXGXGKXXPP 608
PPPPPP PP
Sbjct: 254 PPPPPPADFFANIAPP 269
Score = 22.6 bits (46), Expect(2) = 9.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 552 GXXPPPPPP 578
G PPPPPP
Sbjct: 250 GPPPPPPPP 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,400,987
Number of Sequences: 27780
Number of extensions: 125330
Number of successful extensions: 917
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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