Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_I02
         (745 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293...    52   5e-07
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748...    51   1e-06
04_04_0864 - 28852252-28854582                                         28   6.8  

>04_04_1104 -
           30928475-30928501,30929008-30929110,30929287-30929340,
           30929803-30929895,30930063-30930140,30930416-30930527,
           30930618-30930756,30930823-30930910,30930984-30931079,
           30931675-30931781,30931874-30932009,30932089-30932186,
           30932954-30933047,30933132-30933301,30933749-30933819,
           30936066-30936194,30936552-30936654,30936764-30936907,
           30937123-30937245,30937482-30937563,30939044-30939120,
           30939261-30939315,30939365-30939443,30939544-30939620,
           30939739-30939869,30939947-30940120,30940245-30940310,
           30940937-30941572
          Length = 1113

 Score = 52.0 bits (119), Expect = 5e-07
 Identities = 24/50 (48%), Positives = 35/50 (70%)
 Frame = -3

Query: 509 KCVVIGLQSTGEARTLDQXERDDGDLTDFVSTAKGVLQTLVEKHFPAPDR 360
           KCVV+GLQSTGEART +   +   ++ DFVS  + +L  LVE+++P P +
Sbjct: 527 KCVVVGLQSTGEARTEEAITKYGVEMEDFVSGPRELLLKLVEENYPLPPK 576


>08_01_0774 +
           7482311-7482919,7484012-7484077,7484211-7484384,
           7484473-7484603,7484726-7484802,7484981-7485064,
           7487885-7488066,7488189-7488266,7489813-7489945,
           7491610-7491670,7491861-7491942,7492143-7492271,
           7492510-7492653,7493102-7493204,7493382-7493513,
           7494127-7494485,7495149-7495229,7495384-7495450,
           7495636-7495706,7496087-7496178,7496365-7496458,
           7497692-7497789,7498206-7498341,7498599-7498618,
           7498781-7498876,7498973-7499060,7499171-7499288,
           7499738-7499759,7500203-7500326,7500625-7500702,
           7500837-7500955,7501816-7501869,7502260-7502362,
           7503133-7503261,7503345-7503453,7503788-7503819
          Length = 1424

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = -3

Query: 509 KCVVIGLQSTGEARTLDQXERDDGDLTDFVSTAKGVLQTLVEKHFPAPDR 360
           KCVVIGLQSTGEART +   +   ++ DFVS  + +L  LV+ ++P P +
Sbjct: 629 KCVVIGLQSTGEARTEEAISKYGVEMEDFVSGPRELLLKLVDDNYPLPPK 678


>04_04_0864 - 28852252-28854582
          Length = 776

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 184 PRARLAAAFACWRDVNFLLDVLASSSR 264
           PRAR+AA   CW    F  D+LA+  R
Sbjct: 256 PRARVAAYKVCWAGGCFSSDILAAVDR 282


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.132    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,139,242
Number of Sequences: 37544
Number of extensions: 134359
Number of successful extensions: 434
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)