Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_I02
         (745 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.        112   6e-25
AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB...   112   6e-25
AY118673-1|AAM50533.1| 1436|Drosophila melanogaster AT03687p pro...    81   2e-15
AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA...    81   2e-15

>U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.
          Length = 1547

 Score =  112 bits (269), Expect = 6e-25
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = -3

Query: 509 KCVVIGLQSTGEARTLDQXERDDGDLTDFVSTAKGVLQTLVEKHFPAPDRDRINRLLGL 333
           KCVVIGLQSTGEARTLDQ ERDDG+LTDFVSTAKGV Q+ VE+HFPAPDR+RINR+LGL
Sbjct: 710 KCVVIGLQSTGEARTLDQLERDDGELTDFVSTAKGVFQSFVERHFPAPDRNRINRILGL 768



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 25/49 (51%), Positives = 29/49 (59%)
 Frame = -2

Query: 654 EXIXXXXRMRKTXXGQXXXXXQRXFKYLXIXXKVNHXVVTAREXVKXGQ 508
           E I    RM+KT  GQ     QR FKYL I  KVNH V+ ARE +K G+
Sbjct: 662 ELIDAESRMKKTMWGQFWSSHQRFFKYLCIAAKVNHAVLVARESIKYGK 710



 Score = 35.1 bits (77), Expect = 0.10
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -3

Query: 110 QRAGSDSDLSDFNPFRGGSDSDDEXLAESQKEKKKK 3
           QR+ +    SDFNPF  GSDSD +    ++ +K KK
Sbjct: 873 QRSVASDASSDFNPFFSGSDSDIDPWVNARSKKSKK 908


>AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB,
           isoform B protein.
          Length = 1547

 Score =  112 bits (269), Expect = 6e-25
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = -3

Query: 509 KCVVIGLQSTGEARTLDQXERDDGDLTDFVSTAKGVLQTLVEKHFPAPDRDRINRLLGL 333
           KCVVIGLQSTGEARTLDQ ERDDG+LTDFVSTAKGV Q+ VE+HFPAPDR+RINR+LGL
Sbjct: 710 KCVVIGLQSTGEARTLDQLERDDGELTDFVSTAKGVFQSFVERHFPAPDRNRINRILGL 768



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 25/49 (51%), Positives = 29/49 (59%)
 Frame = -2

Query: 654 EXIXXXXRMRKTXXGQXXXXXQRXFKYLXIXXKVNHXVVTAREXVKXGQ 508
           E I    RM+KT  GQ     QR FKYL I  KVNH V+ ARE +K G+
Sbjct: 662 ELIDAESRMKKTMWGQFWSSHQRFFKYLCIAAKVNHAVLVARESIKYGK 710



 Score = 35.1 bits (77), Expect = 0.10
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -3

Query: 110 QRAGSDSDLSDFNPFRGGSDSDDEXLAESQKEKKKK 3
           QR+ +    SDFNPF  GSDSD +    ++ +K KK
Sbjct: 873 QRSVASDASSDFNPFFSGSDSDIDPWVNARSKKSKK 908


>AY118673-1|AAM50533.1| 1436|Drosophila melanogaster AT03687p
           protein.
          Length = 1436

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 38/60 (63%), Positives = 44/60 (73%)
 Frame = -3

Query: 509 KCVVIGLQSTGEARTLDQXERDDGDLTDFVSTAKGVLQTLVEKHFPAPDRDRINRLLGLG 330
           K VVIGLQSTGE+RTL+  ER  G L  FVSTAK ++Q+ VEKHFPAP RD  + LL  G
Sbjct: 739 KAVVIGLQSTGESRTLEHLERHHGKLNSFVSTAKMIIQSFVEKHFPAPKRDSFHHLLNTG 798


>AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA
            protein.
          Length = 1801

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 38/60 (63%), Positives = 44/60 (73%)
 Frame = -3

Query: 509  KCVVIGLQSTGEARTLDQXERDDGDLTDFVSTAKGVLQTLVEKHFPAPDRDRINRLLGLG 330
            K VVIGLQSTGE+RTL+  ER  G L  FVSTAK ++Q+ VEKHFPAP RD  + LL  G
Sbjct: 1104 KAVVIGLQSTGESRTLEHLERHHGKLNSFVSTAKMIIQSFVEKHFPAPKRDSFHHLLNTG 1163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.132    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,297,192
Number of Sequences: 53049
Number of extensions: 198169
Number of successful extensions: 639
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)