Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_H23
         (727 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   164   7e-41
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   157   1e-38
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663...    29   5.0  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    28   8.7  

>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  164 bits (398), Expect = 7e-41
 Identities = 91/187 (48%), Positives = 111/187 (59%), Gaps = 2/187 (1%)
 Frame = -3

Query: 668 PXDFWFAPX*XIGXLGFTKGKGXQXVHFWWQPXKLPRXXHKVLGN--CLHGAGIXLGXRS 495
           P D  F     I  +G TKGKG + V   W   +LPR  H+ L    C+          +
Sbjct: 207 PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 266

Query: 494 LXSGWSEGYHXRTE*TRNLXYWTGIHKKDGKVIKNNAFTEYDLXEKSITPMGGFPHYGEV 315
           +      GYH RTE  + + Y  G   K G+   + A TE+D  EK ITPMGGFPHYG V
Sbjct: 267 VARAGQNGYHHRTEMNKKV-YKIG---KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVV 321

Query: 314 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 135
             D++MIKGCC+GPKKR++TLR+SL   T R ALE+I LKFIDTSSKFGHGRFQT  +K 
Sbjct: 322 KGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQ 381

Query: 134 AFMGTLK 114
            F G LK
Sbjct: 382 RFFGKLK 388


>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  157 bits (380), Expect = 1e-38
 Identities = 87/179 (48%), Positives = 107/179 (59%), Gaps = 2/179 (1%)
 Frame = -3

Query: 668 PXDFWFAPX*XIGXLGFTKGKGXQXVHFWWQPXKLPRXXHKVLGN--CLHGAGIXLGXRS 495
           P D  F     I  +G TKGKG + V   W   +LPR  H+ L    C+          +
Sbjct: 207 PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYT 266

Query: 494 LXSGWSEGYHXRTE*TRNLXYWTGIHKKDGKVIKNNAFTEYDLXEKSITPMGGFPHYGEV 315
           +      GYH RTE  + + Y  G   K G+   + A TE+D  EK ITPMGGFPHYG V
Sbjct: 267 VARAGQNGYHHRTEMNKKV-YKIG---KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVV 321

Query: 314 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 138
             D++MIKGCC+GPKKR++TLR+SL   T R ALE+I LKFIDTSSKFGHGRFQT  +K
Sbjct: 322 KGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380


>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
            30366541-30366849,30367544-30370567,30370640-30372290,
            30372373-30373463,30373544-30373646,30373737-30374439,
            30374654-30375783,30375913-30376027,30376504-30376695,
            30377443-30377616,30378438-30378494,30378581-30378716,
            30378842-30378927,30379023-30379092,30379993-30380021,
            30380444-30380456,30380762-30381006
          Length = 3582

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 371  DLXEKSITPMGGFPHYGEVNNDFVMIKGCCMG 276
            D    + +P+GG P YG ++ D  +   C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 3   FFFFFALSNVYFHGRHLRLRSSRWGCGSRSFFANTILLEC 122
           FFFFF   +VY   RH R R  R     R  F ++    C
Sbjct: 103 FFFFFFSGDVYCGHRHFRRRRRRRQWDGRLVFGSSGASAC 142


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,248,391
Number of Sequences: 37544
Number of extensions: 356940
Number of successful extensions: 755
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)