Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_H13
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433...    31   0.77 
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           31   0.77 
07_03_1432 - 26508135-26508881,26509301-26509708                       29   3.1  
01_01_0278 - 2281536-2281977,2282523-2282926                           29   3.1  
08_01_0059 - 394001-394708                                             29   4.1  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.4  
02_05_0686 - 30900748-30902167,30903442-30904742                       28   7.1  
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535...    28   9.4  
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093...    28   9.4  

>07_03_0792 -
           21541301-21542143,21542426-21542661,21543177-21543373,
           21543459-21544173,21544250-21544892,21545970-21546139,
           21546442-21546943
          Length = 1101

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +2

Query: 368 PAPPATXXPXPPRXXSPGPGXPXXP 442
           PAP A   P PP+   PGP  P  P
Sbjct: 593 PAPKAAPPPPPPKSTGPGPPRPPPP 617


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 368 PAPPATXXPXPPRXXSPGPGXPXXP 442
           P PP    P  PR   PGPG P  P
Sbjct: 350 PPPPPPAAPAAPRPPGPGPGPPPPP 374


>07_03_1432 - 26508135-26508881,26509301-26509708
          Length = 384

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 368 PAPPATXXPXPPRXXSPGPGXPXXP 442
           P+PP T  P  P   SP P  P  P
Sbjct: 63  PSPPTTYLPPSPTPPSPAPASPSPP 87


>01_01_0278 - 2281536-2281977,2282523-2282926
          Length = 281

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -1

Query: 344 EDRAPPPPLRSLISNLSNTCDLT 276
           +DR P P   SLISN SNT  LT
Sbjct: 198 DDRPPSPSQSSLISNQSNTSTLT 220


>08_01_0059 - 394001-394708
          Length = 235

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +2

Query: 368 PAPPATXXPXPPRXXSPGPGXPXXP 442
           P PPAT  P PPR   P P  P  P
Sbjct: 11  PPPPATP-PPPPRRAPPPPSPPIRP 34


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/56 (25%), Positives = 19/56 (33%)
 Frame = +2

Query: 368 PAPPATXXPXPPRXXSPGPGXPXXPLSXXAXXSXRXSXXXSXXXPXXXPXRXSPXP 535
           P+ P    P PP   S GP  P  PL      +       +   P     + +P P
Sbjct: 709 PSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAP 764


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +2

Query: 368 PAPPATXXPXPPRXXSPGPGXPXXP 442
           P PPA   P PP    P P  P  P
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPP 370


>06_03_0310 -
           19453047-19453160,19453240-19453338,19453441-19453513,
           19453598-19453708,19453795-19453956,19454064-19454340,
           19454542-19455160,19455256-19455471
          Length = 556

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 365 DPAPPATXXPXPPRXXSPGPGXPXXP 442
           DPAP     P PP   +P P  P  P
Sbjct: 162 DPAPSLPHAPAPPPPQAPAPTPPQAP 187


>01_06_1670 -
           39007402-39008229,39008320-39008567,39009159-39009364,
           39009454-39011054
          Length = 960

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +2

Query: 368 PAPPATXXPXPPRXXSPGPGXPXXPL 445
           P  P    P PPR   P P  P  PL
Sbjct: 362 PFAPTLPPPPPPRRKPPSPSPPSSPL 387


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,602,689
Number of Sequences: 37544
Number of extensions: 194157
Number of successful extensions: 1594
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1547
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)