Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_H13
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.30
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 31 0.68
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 31 0.68
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 31 0.68
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 31 0.68
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 31 0.68
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 31 0.68
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 8.4
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = +2
Query: 368 PAPPATXXPXPPRXXSPGP---GXPXXPLSXXAXXSXRXSXXXSXXXPXXXPXRXSPXPX 538
P PPA P PPR SP P G P P + + R P P S P
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Query: 539 XXSG 550
G
Sbjct: 316 QAGG 319
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = +2
Query: 368 PAPPATXXPXPPRXXSPGP---GXPXXPLSXXAXXSXRXSXXXSXXXPXXXPXRXSPXPX 538
P PPA P PPR SP P G P P + + R P P S P
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Query: 539 XXSG 550
G
Sbjct: 337 QAGG 340
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = +2
Query: 368 PAPPATXXPXPPRXXSPGP---GXPXXPLSXXAXXSXRXSXXXSXXXPXXXPXRXSPXPX 538
P PPA P PPR SP P G P P + + R P P S P
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Query: 539 XXSG 550
G
Sbjct: 322 QAGG 325
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 368 PAPPATXXPXPP-RXXSPGPGXPXXPL 445
PAPP + P PP R S GPG P P+
Sbjct: 1074 PAPPPSTIPLPPTRGASVGPGPPAVPV 1100
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 368 PAPPATXXPXPP-RXXSPGPGXPXXPL 445
PAPP + P PP R S GPG P P+
Sbjct: 1068 PAPPPSTIPLPPTRGASVGPGPPAVPV 1094
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 368 PAPPATXXPXPP-RXXSPGPGXPXXPL 445
PAPP + P PP R S GPG P P+
Sbjct: 1074 PAPPPSTIPLPPTRGASVGPGPPAVPV 1100
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 368 PAPPATXXPXPP-RXXSPGPGXPXXPL 445
PAPP + P PP R S GPG P P+
Sbjct: 1068 PAPPPSTIPLPPTRGASVGPGPPAVPV 1094
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 368 PAPPATXXPXPP-RXXSPGPGXPXXPL 445
PAPP + P PP R S GPG P P+
Sbjct: 1068 PAPPPSTIPLPPTRGASVGPGPPAVPV 1094
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 368 PAPPATXXPXPP-RXXSPGPGXPXXPL 445
PAPP + P PP R S GPG P P+
Sbjct: 1074 PAPPPSTIPLPPTRGASVGPGPPAVPV 1100
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 374 PPATXXPXPPRXXSPGPGXPXXP 442
PP P PPR PGP P P
Sbjct: 132 PPQHFPPGPPRPHFPGPPGPHRP 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,093,558
Number of Sequences: 27780
Number of extensions: 121796
Number of successful extensions: 627
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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