Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_H08
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    34   0.11 
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646...    31   0.75 
12_02_0299 - 17051570-17052474,17053542-17053755                       31   1.3  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   5.3  
08_01_0059 - 394001-394708                                             29   5.3  
12_01_0981 + 9931542-9931606,9931779-9933105                           28   9.2  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 24/107 (22%), Positives = 26/107 (24%)
 Frame = +1

Query: 433 PSXXXRAPXPAXPXPXXPPXXXPXYXPPPXXXXXXIXXXXXXXXXXSXXPXPPXXEXXXX 612
           PS    AP P  P P  P    P + PPP                 S  P PP       
Sbjct: 537 PSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPN 596

Query: 613 XXXPXXXPXXVXXRXXSXANTXXXXPRXPXXAXXXXXAXPXFPXXPP 753
              P   P           +     P  P          P  P  PP
Sbjct: 597 CLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPP 643


>04_03_0660 +
           18463011-18463322,18463424-18463516,18464500-18464607,
           18464892-18465044,18465256-18465354,18465443-18465571,
           18465987-18466166,18466208-18466246,18466247-18466363,
           18466445-18466609
          Length = 464

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +1

Query: 433 PSXXXRAPXPAXPXPXXPPXXXPXYXPPP 519
           P    RAP P  P P  PP   P   PPP
Sbjct: 40  PPARHRAPSPPRPPPPPPPPTQPAPPPPP 68


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +1

Query: 451 APXPAXPXPXXPPXXXPXYXPPP 519
           AP PA P P  PP   P   PPP
Sbjct: 270 APPPAFPFPHLPPIFSPPSPPPP 292


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 433 PSXXXRAPXPAXPXPXXPPXXXPXYXPPP 519
           PS    AP P  P P  PP       PPP
Sbjct: 114 PSPPPSAPPPPPPPPTQPPPREAQLAPPP 142


>08_01_0059 - 394001-394708
          Length = 235

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 433 PSXXXRAPXPAXPXPXXPPXXXPXYXPPP 519
           PS   R P P  P P  PP       PPP
Sbjct: 28  PSPPIRPPPPPTPRPYAPPPPSHPLAPPP 56


>12_01_0981 + 9931542-9931606,9931779-9933105
          Length = 463

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/41 (31%), Positives = 14/41 (34%)
 Frame = +2

Query: 380 PPPXXXXXPSRXRXXXXXLXXXXXPRPXPPQXPXXPPXTXL 502
           PPP     P+  R           P P PP  P  P  T L
Sbjct: 48  PPPPPNHIPTTERNTSVFFNTSTIPPPPPPHFPQPPQYTPL 88


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,376,808
Number of Sequences: 37544
Number of extensions: 151897
Number of successful extensions: 1147
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)