Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_G24
(784 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 44 2e-04
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 42 0.001
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 42 0.001
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 39 0.007
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 39 0.007
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 37 0.027
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 37 0.027
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 37 0.036
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 34 0.25
BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p pro... 31 1.3
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 31 1.3
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 31 1.3
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 31 1.3
AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA topoisom... 31 1.3
AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-P... 31 1.3
AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p pro... 31 1.8
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 31 1.8
AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation i... 31 1.8
AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,... 31 1.8
AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,... 31 1.8
AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,... 31 1.8
AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,... 31 1.8
AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,... 31 1.8
AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,... 31 1.8
AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,... 31 1.8
AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p pro... 29 7.2
AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-P... 29 7.2
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 44.4 bits (100), Expect = 2e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = -1
Query: 517 WFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRR 338
WFVRN LH DL L ++ + S R+ D+ RH N L A P R+ +RR+
Sbjct: 837 WFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNR--SRPPRRL--NRRQ 892
Query: 337 PKHVISDPP 311
P+ +I+ P
Sbjct: 893 PRDLITRSP 901
Score = 34.3 bits (75), Expect = 0.19
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 659 NKVTXYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVG 525
NK+T YK + P Y ++ A H+K Q IQ++ R+ G
Sbjct: 790 NKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITG 834
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 41.5 bits (93), Expect = 0.001
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -3
Query: 659 NKVTXYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAP 519
NK+ +KT P++ Y S V+ A+ H+K QI Q++ ++ + P
Sbjct: 815 NKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLP 861
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 41.5 bits (93), Expect = 0.001
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -3
Query: 659 NKVTXYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAP 519
NK+ +KT P++ Y S V+ A+ H+K QI Q++ ++ + P
Sbjct: 763 NKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLP 809
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -3
Query: 656 KVTXYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAP 519
K Y + ++P+ TY S ++ +A+R ++ Q QSR RI GAP
Sbjct: 782 KALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAP 827
Score = 36.3 bits (80), Expect = 0.047
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -1
Query: 520 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 401
PW++RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -3
Query: 656 KVTXYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAP 519
K Y + ++P+ TY S ++ +A+R ++ Q QSR RI GAP
Sbjct: 782 KALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAP 827
Score = 36.3 bits (80), Expect = 0.047
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -1
Query: 520 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 401
PW++RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 37.1 bits (82), Expect = 0.027
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -3
Query: 656 KVTXYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAP 519
KV YK+ + P + Y V+ AA+ HL +I+Q++ R GAP
Sbjct: 796 KVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAP 841
Score = 35.9 bits (79), Expect = 0.062
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -1
Query: 529 SEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RME 353
S PW++R D+ DL + + LQ+ + ++ ++ H N L G AD R
Sbjct: 838 SGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTR 897
Query: 352 SSRRRPKHVISDPPD 308
RR +H D P+
Sbjct: 898 VKRRLKRHHPHDLPN 912
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 37.1 bits (82), Expect = 0.027
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -3
Query: 656 KVTXYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAP 519
KV YK+ + P + Y V+ AA+ HL +I+Q++ R GAP
Sbjct: 598 KVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAP 643
Score = 35.9 bits (79), Expect = 0.062
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -1
Query: 529 SEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RME 353
S PW++R D+ DL + + LQ+ + ++ ++ H N L G AD R
Sbjct: 640 SGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERLNVHPNSLARKLGTAAVVNADPRTR 699
Query: 352 SSRRRPKHVISDPPD 308
RR +H D P+
Sbjct: 700 VKRRLKRHHPHDLPN 714
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 36.7 bits (81), Expect = 0.036
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -3
Query: 659 NKVTXYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAP-VVRQE 504
+KV Y + ++P+ TY S ++ +A+ ++ Q QS+ R GAP VR E
Sbjct: 783 HKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSE 835
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 33.9 bits (74), Expect = 0.25
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 520 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 401
P++VR LH DL+L ++ + + + R+ D+ RH + L
Sbjct: 842 PYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p
protein.
Length = 1250
Score = 31.5 bits (68), Expect = 1.3
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = -1
Query: 529 SEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMES 350
SEP W ++ + DDL +E A R FDK A EN L++ PDP +ES
Sbjct: 256 SEPFWKIKVLHTIDDLTVE-----FNWARNRLFDKEAC-ENYLLLCLAE--PDPRALVES 307
Query: 349 SRRRPKH 329
+PKH
Sbjct: 308 VTVKPKH 314
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 514 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRR 341
+ R D+ +++S + AS R+ + HENPLI + Y P +R+E S+
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKN 958
Query: 340 R 338
R
Sbjct: 959 R 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 514 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRR 341
+ R D+ +++S + AS R+ + HENPLI + Y P +R+E S+
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKN 958
Query: 340 R 338
R
Sbjct: 959 R 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 514 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRR 341
+ R D+ +++S + AS R+ + HENPLI + Y P +R+E S+
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKN 958
Query: 340 R 338
R
Sbjct: 959 R 959
>AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA
topoisomerase III alpha protein.
Length = 1250
Score = 31.5 bits (68), Expect = 1.3
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = -1
Query: 529 SEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMES 350
SEP W ++ + DDL +E A R FDK A EN L++ PDP +ES
Sbjct: 256 SEPFWKIKVLHTIDDLTVE-----FNWARNRLFDKEAC-ENYLLLCLAE--PDPRALVES 307
Query: 349 SRRRPKH 329
+PKH
Sbjct: 308 VTVKPKH 314
>AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-PA
protein.
Length = 1250
Score = 31.5 bits (68), Expect = 1.3
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = -1
Query: 529 SEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMES 350
SEP W ++ + DDL +E A R FDK A EN L++ PDP +ES
Sbjct: 256 SEPFWKIKVLHTIDDLTVE-----FNWARNRLFDKEAC-ENYLLLCLAE--PDPRALVES 307
Query: 349 SRRRPKH 329
+PKH
Sbjct: 308 VTVKPKH 314
>AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p
protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 481 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 305
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 304 L 302
+
Sbjct: 105 M 105
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 514 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRR 341
+ R D+ +++S + AS R+ + HENPLI + Y P +R+E S+
Sbjct: 455 YTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKN 511
Query: 340 R 338
R
Sbjct: 512 R 512
>AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation
initiation factor 5C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 481 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 305
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 304 L 302
+
Sbjct: 105 M 105
>AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,
isoform G protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 481 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 305
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 304 L 302
+
Sbjct: 105 M 105
>AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,
isoform F protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 481 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 305
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 304 L 302
+
Sbjct: 105 M 105
>AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,
isoform E protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 481 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 305
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 304 L 302
+
Sbjct: 105 M 105
>AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,
isoform D protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 481 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 305
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 304 L 302
+
Sbjct: 105 M 105
>AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,
isoform C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 481 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 305
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 304 L 302
+
Sbjct: 105 M 105
>AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,
isoform B protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 481 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 305
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 304 L 302
+
Sbjct: 105 M 105
>AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,
isoform A protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 481 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 305
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 304 L 302
+
Sbjct: 105 M 105
>AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p
protein.
Length = 268
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 326 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 174
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
>AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-PA
protein.
Length = 268
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 326 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 174
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,087,309
Number of Sequences: 53049
Number of extensions: 645856
Number of successful extensions: 1718
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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