Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_G21
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.53
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.53
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.53
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.92
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.92
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 2.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 501 AGXPPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXPXXLG 662
AG PPPP PP + P P GS PP P P P G
Sbjct: 234 AGSPPPPPPPKGS-PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/82 (28%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +1
Query: 463 PPPPXXPXXXRXXRGXXPRPXRXXXPXXPXXXGSXLXXXXXXAXXPPXPXXXRXRXXFRA 642
PPPP R P P P P GS A PP P R +
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTGS 311
Query: 643 -PXPXXXGXPAXXXXGSGXAXP 705
P P G P GS P
Sbjct: 312 LPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 501 AGXPPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXPXXLG 662
AG PPPP PP + P P GS PP P P P G
Sbjct: 255 AGSPPPPPPPKGS-PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/82 (28%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +1
Query: 463 PPPPXXPXXXRXXRGXXPRPXRXXXPXXPXXXGSXLXXXXXXAXXPPXPXXXRXRXXFRA 642
PPPP R P P P P GS A PP P R +
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTGS 332
Query: 643 -PXPXXXGXPAXXXXGSGXAXP 705
P P G P GS P
Sbjct: 333 LPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 501 AGXPPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXPXXLG 662
AG PPPP PP + P P GS PP P P P G
Sbjct: 240 AGSPPPPPPPKGS-PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/82 (28%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +1
Query: 463 PPPPXXPXXXRXXRGXXPRPXRXXXPXXPXXXGSXLXXXXXXAXXPPXPXXXRXRXXFRA 642
PPPP R P P P P GS A PP P R +
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTGS 317
Query: 643 -PXPXXXGXPAXXXXGSGXAXP 705
P P G P GS P
Sbjct: 318 LPPPQAGGSPPPAGTGSPPPPP 339
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 0.92
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = +3
Query: 510 PPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXPXXLGXPGXXG 680
P PP PPS P P R G PP P P P P P G PG G
Sbjct: 285 PRPPPPPSSGMWPPPP--PPPPGRTPG--PPGMPGMP-----PPPPPSRFGPPGMGG 332
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 510 PPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXPXXLGXPG 671
PPPP PP P P PP P P P P + PG
Sbjct: 298 PPPPPPPGRTPGP------PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 345
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 0.92
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = +3
Query: 510 PPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXPXXLGXPGXXG 680
P PP PPS P P R G PP P P P P P G PG G
Sbjct: 295 PRPPPPPSSGMWPPPP--PPPPGRTPG--PPGMPGMP-----PPPPPSRFGPPGMGG 342
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 510 PPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXPXXLGXPG 671
PPPP PP P P PP P P P P + PG
Sbjct: 308 PPPPPPPGRTPGP------PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 355
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 468 PALXPXXXXXXAGXPPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPX 647
P P G PPPP PP P P G PP P P P
Sbjct: 728 PPPPPGGLPPITGGPPPP-PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 648 PXXLG 662
P G
Sbjct: 787 PPPPG 791
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 3/71 (4%)
Frame = +3
Query: 468 PALXPXXXXXXAGXPPPPXP---PSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFP 638
P P G PPPP P P P P PP P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-PPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 639 XPXPXXLGXPG 671
P P G G
Sbjct: 772 PPPPPPGGFKG 782
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 468 PALXPXXXXXXAGXPPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPX 647
P P G PPPP PP P P G PP P P P
Sbjct: 728 PPPPPGGLPPITGGPPPP-PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 648 PXXLG 662
P G
Sbjct: 787 PPPPG 791
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 3/71 (4%)
Frame = +3
Query: 468 PALXPXXXXXXAGXPPPPXP---PSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFP 638
P P G PPPP P P P P PP P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-PPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 639 XPXPXXLGXPG 671
P P G G
Sbjct: 772 PPPPPPGGFKG 782
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 468 PALXPXXXXXXAGXPPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPX 647
P P G PPPP PP P P G PP P P P
Sbjct: 311 PPPPPGGLPPITGGPPPP-PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 648 PXXLG 662
P G
Sbjct: 370 PPPPG 374
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 3/71 (4%)
Frame = +3
Query: 468 PALXPXXXXXXAGXPPPPXP---PSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFP 638
P P G PPPP P P P P PP P P P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-PPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 639 XPXPXXLGXPG 671
P P G G
Sbjct: 355 PPPPPPGGFKG 365
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/60 (36%), Positives = 22/60 (36%)
Frame = +3
Query: 501 AGXPPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXPXXLGXPGXXG 680
AG P PP P A P P GS PP P P P P P G PG G
Sbjct: 180 AGPPGPPGPDGNAG-PAGAPGVPGPDGDAGSPPPPGPPGP-----PGP-PGNDGQPGAPG 232
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 510 PPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXP 650
PPPP PP P PP P P P P P
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +3
Query: 510 PPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXP 650
PPPP PP F P PP P + P P P
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 510 PPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXP 650
PPPP PP P PP P P P P P
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +3
Query: 510 PPPPXPPSXAXXPXXXXFXPXXXRXXGSXPPXSPXXPAXXXFPXPXP 650
PPPP PP F P PP P + P P P
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPP 814
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 4/61 (6%)
Frame = +3
Query: 510 PPPPXPPSXAXXPXXXXFX----PXXXRXXGSXPPXSPXXPAXXXFPXPXPXXLGXPGXX 677
PPP P A P F P G PP P P P P G P
Sbjct: 380 PPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPG 439
Query: 678 G 680
G
Sbjct: 440 G 440
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,952,877
Number of Sequences: 27780
Number of extensions: 110048
Number of successful extensions: 969
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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