Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_G17
(772 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 33 1.5
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 33 1.5
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 33 1.5
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 33 1.5
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 33 1.5
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 33 1.5
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 32 2.0
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 32 2.0
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 32 2.0
BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein. 32 2.0
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 32 2.0
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 32 2.0
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 32 2.0
X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for ... 32 2.6
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 32 2.6
BC063646-1|AAH63646.1| 678|Homo sapiens collagen, type IX, alph... 32 2.6
AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha ... 32 2.6
AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha ... 32 2.6
AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha ... 32 2.6
AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha ... 32 2.6
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 3.5
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 3.5
X07884-1|CAA30731.1| 472|Homo sapiens protein ( Human mRNA for ... 31 3.5
M36546-1|AAA60150.1| 472|Homo sapiens COL1A1 protein. 31 3.5
M20789-1|AAB59373.1| 589|Homo sapiens alpha-1 type I collagen p... 31 3.5
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 3.5
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 3.5
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 3.5
X57010-1|CAA40330.1| 243|Homo sapiens collagen II alpha 1 chain... 31 6.0
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 31 6.0
X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for ... 31 6.0
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 31 6.0
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 31 6.0
X98710-1|CAA67266.1| 193|Homo sapiens COL1A1 and PDGFB fusion t... 30 8.0
X02488-1|CAA26320.1| 94|Homo sapiens protein ( Human pro-alpha... 30 8.0
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 30 8.0
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PG GGQ P P G G+PG G+ G
Sbjct: 771 PGEKGGQGPPGPQGPIGYPGPRGVKGADG 799
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PG GGQ P P G G+PG G+ G
Sbjct: 771 PGEKGGQGPPGPQGPIGYPGPRGVKGADG 799
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PG GGQ P P G G+PG G+ G
Sbjct: 771 PGEKGGQGPPGPQGPIGYPGPRGVKGADG 799
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PG GGQ P P G G+PG G+ G
Sbjct: 771 PGEKGGQGPPGPQGPIGYPGPRGVKGADG 799
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PG GGQ P P G G+PG G+ G
Sbjct: 771 PGEKGGQGPPGPQGPIGYPGPRGVKGADG 799
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V
collagen variant protein.
Length = 1792
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PG GGQ P P G G+PG G+ G
Sbjct: 725 PGEKGGQGPPGPQGPIGYPGPRGVKGADG 753
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
SPG G P P GS G PGK G + + G
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPG 893
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
SPG G P P GS G PGK G + + G
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPG 893
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
SPG G P P GS G PGK G + + G
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPG 893
>BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein.
Length = 695
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
SPG G P P GS G PGK G + + G
Sbjct: 472 SPGIPGAPGPIGPPGSPGLPGKAGASGFPG 501
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
SPG G P P GS G PGK G + + G
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPG 893
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
SPG G P P GS G PGK G + + G
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPG 893
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
SPG G P P GS G PGK G + + G
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPG 893
>X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for
alpha1(IX) collagen (long form). ).
Length = 931
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PGR G P P G GFPG+ G+ G
Sbjct: 792 PGRPGPPGPPGPPGENGFPGQMGIRGLPG 820
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
SPG G P P GS G PGK G + + G
Sbjct: 783 SPGIPGAPGPIGPPGSPGLPGKAGRSGFPG 812
>BC063646-1|AAH63646.1| 678|Homo sapiens collagen, type IX, alpha 1
protein.
Length = 678
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PGR G P P G GFPG+ G+ G
Sbjct: 549 PGRPGPPGPPGPPGENGFPGQMGIRGLPG 577
>AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PGR G P P G GFPG+ G+ G
Sbjct: 792 PGRPGPPGPPGPPGENGFPGQMGIRGLPG 820
>AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PGR G P P G GFPG+ G+ G
Sbjct: 792 PGRPGPPGPPGPPGENGFPGQMGIRGLPG 820
>AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha I
chain, short form protein.
Length = 678
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PGR G P P G GFPG+ G+ G
Sbjct: 549 PGRPGPPGPPGPPGENGFPGQMGIRGLPG 577
>AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha I
chain, long form protein.
Length = 921
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PGR G P P G GFPG+ G+ G
Sbjct: 792 PGRPGPPGPPGPPGENGFPGQMGIRGLPG 820
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXGFXXF 576
PGR G + P P G+ G PG GL G F
Sbjct: 238 PGRPGERGPPGPQGARGLPGTAGLPGMKGHRGF 270
Score = 30.3 bits (65), Expect = 8.0
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 481 GRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
G G P P GS G PGK GLN G
Sbjct: 1133 GASGPAGPRGPPGSAGAPGKDGLNGLPG 1160
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXGFXXF 576
PGR G + P P G+ G PG GL G F
Sbjct: 238 PGRPGERGPPGPQGARGLPGTAGLPGMKGHRGF 270
>X07884-1|CAA30731.1| 472|Homo sapiens protein ( Human mRNA for
alpha-1(I) chain of procollagen type I. ).
Length = 472
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXGFXXF 576
PGR G + P P G+ G PG GL G F
Sbjct: 238 PGRPGERGPPGPQGARGLPGTAGLPGMKGHRGF 270
>M36546-1|AAA60150.1| 472|Homo sapiens COL1A1 protein.
Length = 472
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXGFXXF 576
PGR G + P P G+ G PG GL G F
Sbjct: 238 PGRPGERGPPGPQGARGLPGTAGLPGMKGHRGF 270
>M20789-1|AAB59373.1| 589|Homo sapiens alpha-1 type I collagen
protein.
Length = 589
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXGFXXF 576
PGR G + P P G+ G PG GL G F
Sbjct: 238 PGRPGERGPPGPQGARGLPGTAGLPGMKGHRGF 270
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXGFXXF 576
PGR G + P P G+ G PG GL G F
Sbjct: 238 PGRPGERGPPGPQGARGLPGTAGLPGMKGHRGF 270
Score = 30.3 bits (65), Expect = 8.0
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 481 GRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
G G P P GS G PGK GLN G
Sbjct: 1133 GASGPAGPRGPPGSAGAPGKDGLNGLPG 1160
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXGFXXF 576
PGR G + P P G+ G PG GL G F
Sbjct: 235 PGRPGERGPPGPQGARGLPGTAGLPGMKGHRGF 267
Score = 30.3 bits (65), Expect = 8.0
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 481 GRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
G G P P GS G PGK GLN G
Sbjct: 1130 GASGPAGPRGPPGSAGAPGKDGLNGLPG 1157
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXGFXXF 576
PGR G + P P G+ G PG GL G F
Sbjct: 241 PGRPGERGPPGPQGARGLPGTAGLPGMKGHRGF 273
Score = 30.3 bits (65), Expect = 8.0
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 481 GRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
G G P P GS G PGK GLN G
Sbjct: 1136 GASGPAGPRGPPGSAGAPGKDGLNGLPG 1163
>X57010-1|CAA40330.1| 243|Homo sapiens collagen II alpha 1 chain
protein.
Length = 243
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGL 549
PG+ G + P P G+ GFPG GL
Sbjct: 162 PGKAGERGPPGPQGARGFPGTPGL 185
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGL 549
PG+ G + P P G+ GFPG GL
Sbjct: 191 PGKAGERGPPGPQGARGFPGTPGL 214
>X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for
alpha-1 type II collagen. ).
Length = 1418
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGL 549
PG+ G + P P G+ GFPG GL
Sbjct: 191 PGKAGERGPPGPQGARGFPGTPGL 214
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGL 549
PG+ G + P P G+ GFPG GL
Sbjct: 260 PGKAGERGPPGPQGARGFPGTPGL 283
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGL 549
PG+ G + P P G+ GFPG GL
Sbjct: 260 PGKAGERGPPGPQGARGFPGTPGL 283
>X98710-1|CAA67266.1| 193|Homo sapiens COL1A1 and PDGFB fusion
transcript protein.
Length = 193
Score = 30.3 bits (65), Expect = 8.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PGR G + P P G+ G PG GL G
Sbjct: 143 PGRPGERGPPGPQGARGLPGTAGLPGMKG 171
>X02488-1|CAA26320.1| 94|Homo sapiens protein ( Human
pro-alpha-2(I) mRNA for collagen N-prepropeptide. ).
Length = 94
Score = 30.3 bits (65), Expect = 8.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGL 549
PGR GG P P G G PG GL
Sbjct: 51 PGRDGGDGPPGPPGPPGPPGPPGL 74
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.3 bits (65), Expect = 8.0
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 481 GRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
G G P P GS G PGK GLN G
Sbjct: 709 GASGPAGPRGPPGSAGAPGKDGLNGLPG 736
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,866,740
Number of Sequences: 237096
Number of extensions: 1401168
Number of successful extensions: 7048
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6990
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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