Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_G17
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 30 2.1
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 29 4.8
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 28 6.4
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 28 6.4
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 8.5
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
PG+ G P P G GFPG G + G
Sbjct: 238 PGQDGAPGPAGPAGQDGFPGNAGSDGQPG 266
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXG 546
+PG G P P G GFPG+ G
Sbjct: 219 APGAPGNAGPAGPAGQDGFPGQDG 242
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXGLNNWXGFXXFG 579
PG+ G P P G G PG G N G FG
Sbjct: 217 PGKPGDVGPCGPEGPKGAPGTPGKNGAPGDRGFG 250
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXG 546
+PG G P P G GFPG+ G
Sbjct: 235 APGAPGNAGPAGPSGQDGFPGQDG 258
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXG 546
+PG G P P G GFPG+ G
Sbjct: 219 APGAPGNAGPAGPSGQDGFPGQDG 242
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXGLNNWXG 564
+PG G Q P G G G G N W G
Sbjct: 218 APGAPGAQGKPGPSGPPGIDGYPGQNGWKG 247
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXGL 549
SPG GG P P G+ G PG G+
Sbjct: 176 SPGPPGGVGPPGPNGTPGAPGDEGI 200
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXG 546
+PG+ G Q P P GS G PG G
Sbjct: 221 APGQAGPQGPPGPAGSPGAPGGPG 244
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXG 546
+PG+ G Q P P GS G PG G
Sbjct: 221 APGQAGPQGPPGPAGSPGAPGGPG 244
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXG 546
+PG+ G Q P P GS G PG G
Sbjct: 221 APGQAGPQGPPGPAGSPGAPGGPG 244
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXG 546
+PG+ G Q P P GS G PG G
Sbjct: 221 APGQAGPQGPPGPAGSPGAPGGPG 244
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXG 546
PGR G P P G G+PG G
Sbjct: 990 PGRDGQPGPVGPPGDDGYPGAPG 1012
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXG 546
PGR G P P G G+PG G
Sbjct: 1247 PGRDGQPGPVGPPGDDGYPGAPG 1269
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXG 546
PGR G P P G G+PG G
Sbjct: 1246 PGRDGQPGPVGPPGDDGYPGAPG 1268
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXG 546
SPG GG P P G G PG G
Sbjct: 132 SPGEAGGAGPPGPPGPDGNPGAPG 155
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 475 SPGRHGGQXPXKPXGSXGFPGKXG 546
SPG GG P P G G PG G
Sbjct: 132 SPGEAGGAGPPGPPGPDGNPGAPG 155
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXG 546
PG G Q P P G+ G PG+ G
Sbjct: 207 PGAPGAQGPKGPPGAAGRPGRDG 229
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 478 PGRHGGQXPXKPXGSXGFPGKXG 546
PG G Q P P G+ G PG+ G
Sbjct: 260 PGAPGAQGPKGPPGAAGRPGRDG 282
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 367 PADRMESSRRRPKHVISDPPDP 302
P ++RRR +HV+S PP P
Sbjct: 4 PVVEFTTARRRKRHVVSTPPPP 25
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,585,842
Number of Sequences: 27780
Number of extensions: 191336
Number of successful extensions: 1422
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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