Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_G16
(762 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 238 5e-64
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 237 2e-63
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 187 1e-48
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 153 3e-38
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 146 4e-36
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 38 0.002
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.034
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.9
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 27 3.9
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 5.1
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 8.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 238 bits (583), Expect = 5e-64
Identities = 123/179 (68%), Positives = 133/179 (74%)
Frame = -1
Query: 615 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKXINPDEXXXXXXXXXXAILHGDKSEEVQDX 436
++IVLVGGSTRIP+VQKL+ DFFNGKE K INPDE A+L GD SE+ QD
Sbjct: 330 NEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDL 389
Query: 435 XXXXXXXXXLGIETAGGVMTTLIKRNXXXXXXXXXXXXTYSDNQPGVLIQVFEGERAMTK 256
+GIETAGGVMT LIKRN TYSDNQPGVLIQVFEGERA TK
Sbjct: 390 LLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTK 449
Query: 255 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRL 79
D NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRL
Sbjct: 450 DCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRL 508
Score = 28.7 bits (61), Expect = 0.96
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2
Query: 74 KEEIERMVNEAEKYR 30
KEEI+RMV EAEKY+
Sbjct: 510 KEEIDRMVAEAEKYK 524
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 237 bits (579), Expect = 2e-63
Identities = 123/179 (68%), Positives = 133/179 (74%)
Frame = -1
Query: 615 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKXINPDEXXXXXXXXXXAILHGDKSEEVQDX 436
++IVLVGGSTRIP++QKL+ DFFNGKE K INPDE AIL GD SE+ QD
Sbjct: 330 NEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDL 389
Query: 435 XXXXXXXXXLGIETAGGVMTTLIKRNXXXXXXXXXXXXTYSDNQPGVLIQVFEGERAMTK 256
LGIETAGGVMT LIKRN TY+DNQPGVLIQVFEGERA TK
Sbjct: 390 LLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTK 449
Query: 255 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRL 79
D NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRL
Sbjct: 450 DCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRL 508
Score = 29.9 bits (64), Expect = 0.41
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = -2
Query: 74 KEEIERMVNEAEKYR 30
KEEI+RMV+EAEKY+
Sbjct: 510 KEEIDRMVSEAEKYK 524
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 187 bits (456), Expect = 1e-48
Identities = 102/181 (56%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
Frame = -1
Query: 612 DIVLVGGSTRIPKVQKLLQDFFNGKELNKXINPDEXXXXXXXXXXAILHGDKSEEVQDXX 433
DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE +L G++ + +
Sbjct: 363 DIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIV 419
Query: 432 XXXXXXXXLGIETAGGVMTTLIKRNXXXXXXXXXXXXTYSDNQPGVLIQVFEGERAMTKD 253
LGIET GGVMT LI RN T DNQ VLIQV+EGER +TKD
Sbjct: 420 LLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKD 479
Query: 252 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLX 76
NNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I NDKGRL
Sbjct: 480 NNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLS 539
Query: 75 Q 73
+
Sbjct: 540 E 540
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 153 bits (370), Expect = 3e-38
Identities = 82/180 (45%), Positives = 105/180 (58%), Gaps = 1/180 (0%)
Frame = -1
Query: 615 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKXINPDEXXXXXXXXXXAILHGDK-SEEVQD 439
HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNK INPDE A+L S++ QD
Sbjct: 334 HDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQD 393
Query: 438 XXXXXXXXXXLGIETAGGVMTTLIKRNXXXXXXXXXXXXTYSDNQPGVLIQVFEGERAMT 259
LG+ G V + RN T +DNQ V V++GER
Sbjct: 394 LLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNC 453
Query: 258 KDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRL 79
+N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+T + I ITN G L
Sbjct: 454 AENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHL 513
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 146 bits (353), Expect = 4e-36
Identities = 77/177 (43%), Positives = 107/177 (60%)
Frame = -1
Query: 615 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKXINPDEXXXXXXXXXXAILHGDKSEEVQDX 436
++++LVGG TR+P+V + ++ F +E K +NPDE +L G V+D
Sbjct: 378 NEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDL 432
Query: 435 XXXXXXXXXLGIETAGGVMTTLIKRNXXXXXXXXXXXXTYSDNQPGVLIQVFEGERAMTK 256
LGIET GGV T LI RN T +D Q V I+VF+GER + +
Sbjct: 433 VLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVR 492
Query: 255 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKG 85
DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G
Sbjct: 493 DNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG 549
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 37.5 bits (83), Expect = 0.002
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = -1
Query: 615 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKXINPDE 508
+ I+L GG++RIP +Q L D+ + +++K +N DE
Sbjct: 366 NSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 33.5 bits (73), Expect = 0.034
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = -1
Query: 615 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKXINPDE 508
+ I +VGG TR+P V++++ ++F GK L+ +N DE
Sbjct: 338 YSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 143 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 280
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 3.9
Identities = 24/95 (25%), Positives = 35/95 (36%)
Frame = +1
Query: 214 WDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSS 393
WD G+ ++ I GHS +L L+ +G V+ S+ H
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLE--NGSVLTANYNSASISRSKAKDEKPHVWHHEGK 118
Query: 394 SLNTEGKGCYIKQQQILHLLRLVTVQDSSLDSCTI 498
SL+ E + Q H LV D LD +I
Sbjct: 119 SLHPERQTSSHPHQVTAH-KHLVCSVDLGLDRFSI 152
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 359 TLPSPLNRLRHSPPTLITNPEYSSKYLR 276
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.4 bits (53), Expect = 8.9
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 289 DEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTV 468
D+YS L + + EC+++F + D S+ N EGK ++L LL
Sbjct: 343 DQYS-LHLTMAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDEGNA 401
Query: 469 QDSSLDSCTISYGLVR 516
++S+ + Y + R
Sbjct: 402 EESTKIRLLLLYIIYR 417
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,621,077
Number of Sequences: 5004
Number of extensions: 48086
Number of successful extensions: 190
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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