Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_G16
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   1.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   3.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.1  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   4.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   5.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.4  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 618 SHDIVLVGGSTRIPKVQKLLQDFFNGKELNKXINPDE 508
           S+D ++VGG      V   L +  N K L     PDE
Sbjct: 68  SYDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDE 104


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 265 STLTLKYLDEY-SGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCY 423
           + L ++ +D   SG +I   G+ + +++ +G   L      +S S+NT+  G Y
Sbjct: 330 NALEMRLMDAIDSGYLIDEYGKKIDIYTPEGLNMLGNVIEGSSDSINTKFYGMY 383


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 317 TLITNPEYSSKYLR 276
           T I N  YSSKY+R
Sbjct: 199 TYIVNTNYSSKYMR 212



 Score = 23.0 bits (47), Expect = 3.1
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +1

Query: 265 STLTLKYLDEY-SGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCY 423
           + L ++ +D   SG +I   G+ + +++ +G   L       S S+NT+  G Y
Sbjct: 330 NALEMRLMDAIDSGYLIDEYGKKIDIYTPEGLNMLGNVIEGNSDSINTKFYGMY 383


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +1

Query: 292 EYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQ 471
           E+ G+   +G   ++L SG+    LD  GH  ++ ++   +G +I    +L +     V+
Sbjct: 174 EFGGITQCIGAFDVTLESGERVTFLDTPGH--AAFISMRHRGAHITDIVVLVVAADDGVK 231

Query: 472 DSSLDS 489
           + +L S
Sbjct: 232 EQTLQS 237


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 142  RYREVHQQGEQDHHYQRQRSSLPRK 68
            R REVH  G+Q+   ++  +S P++
Sbjct: 1425 REREVHNGGQQEDRDRKTLTSAPQQ 1449



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 362  VTLPSPLNRLRHSPP 318
            +T PSP  R R++PP
Sbjct: 986  MTDPSPFKRGRYTPP 1000


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
          protein precursor protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 33 VLLCLINHTLDLFLGRDD 86
          VL+CL+N T    +G D+
Sbjct: 11 VLICLLNETAKAIIGVDE 28


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +1

Query: 607 NIVGFXPYPSWASRKXLLHWAPW 675
           ++VG      W   + ++HW P+
Sbjct: 124 SVVGRKKSSGWRKLRNIVHWTPF 146



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 100 YQRQRSSLPRKRSSVW 53
           YQR  S + RK+SS W
Sbjct: 119 YQRNPSVVGRKKSSGW 134


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 200 PRGAGGIPVS 229
           PRG GG+P S
Sbjct: 399 PRGPGGVPTS 408


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,374
Number of Sequences: 438
Number of extensions: 3571
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)