Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_G15
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical p...    29   2.6  
AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical ...    28   6.0  
U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   7.9  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   7.9  

>U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical
           protein B0336.3 protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 22/78 (28%), Positives = 35/78 (44%)
 Frame = -1

Query: 695 RXHQPXSSNPRFXTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMA 516
           + + P S+ P   + T PDL         P      PG++   SS +PSA     S  + 
Sbjct: 76  KSYMPASTAPTSASATAPDLKKEKAPAEKPSKPTAPPGVQK--SSSSPSA-SKAESRPLR 132

Query: 515 KGVSPPYFQVNDESQASR 462
           K +SPP  +  ++ + SR
Sbjct: 133 KRISPPPSENREKEKQSR 150


>AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical
           protein F49F1.1 protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -1

Query: 668 PRFXTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPS 549
           P   T  TP+LT++++ P+T   K     + P  +++ P+
Sbjct: 174 PLVLTTLTPELTTVTVEPITSTLKPTTTTITPTTTTKLPT 213


>U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical
           protein F59A3.2b protein.
          Length = 687

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = -1

Query: 668 PRFXTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAP-SAYLTPSSLGMAKGVSPPYF 492
           PR     TP L  + I+P+     +F P + PP    +P  A   P++L      S P  
Sbjct: 525 PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNT 584

Query: 491 QV-NDES 474
            V N ES
Sbjct: 585 YVPNQES 591


>U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical
           protein F59A3.2a protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = -1

Query: 668 PRFXTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAP-SAYLTPSSLGMAKGVSPPYF 492
           PR     TP L  + I+P+     +F P + PP    +P  A   P++L      S P  
Sbjct: 525 PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNT 584

Query: 491 QV-NDES 474
            V N ES
Sbjct: 585 YVPNQES 591


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 572  PLSSEAPSAYLTPSSLGMAKGVSPP 498
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 572  PLSSEAPSAYLTPSSLGMAKGVSPP 498
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,042,903
Number of Sequences: 27780
Number of extensions: 271194
Number of successful extensions: 840
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)