Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_G10
(784 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 35 0.084
12_02_1174 - 26696869-26698191 31 1.4
01_01_0570 - 4231100-4232560 30 2.4
06_03_1326 - 29355467-29355817 29 3.2
06_03_0790 - 24636805-24637770 29 3.2
03_02_0765 + 11000724-11002496 29 3.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 4.2
07_03_0558 + 19461369-19462448 29 4.2
03_01_0023 + 198414-198968 29 5.5
07_03_1751 - 29215074-29216270 28 7.3
07_03_0560 + 19479597-19480667 28 9.6
06_01_0178 + 1386981-1387505 28 9.6
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 28 9.6
02_05_0686 - 30900748-30902167,30903442-30904742 28 9.6
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 28 9.6
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 34.7 bits (76), Expect = 0.084
Identities = 19/73 (26%), Positives = 19/73 (26%)
Frame = +2
Query: 518 GXXPXXXXPPXXPPAXXPPXQXXXXXXXXXPPAPXXXXXXXPXXPXXXPXXXXXXXXXXX 697
G P PP PP PP PP P P P
Sbjct: 556 GNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNR 615
Query: 698 RXPPPXPPXXXXP 736
PPP PP P
Sbjct: 616 SVPPPPPPPPPLP 628
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/70 (24%), Positives = 18/70 (25%)
Frame = +2
Query: 527 PXXXXPPXXPPAXXPPXQXXXXXXXXXPPAPXXXXXXXPXXPXXXPXXXXXXXXXXXRXP 706
P PP PP+ P PP P P P P
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPP 603
Query: 707 PPXPPXXXXP 736
PP PP P
Sbjct: 604 PPPPPPPILP 613
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/70 (24%), Positives = 18/70 (25%)
Frame = +2
Query: 527 PXXXXPPXXPPAXXPPXQXXXXXXXXXPPAPXXXXXXXPXXPXXXPXXXXXXXXXXXRXP 706
P PP PP PP + P P P P P P
Sbjct: 149 PPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQP 208
Query: 707 PPXPPXXXXP 736
P PP P
Sbjct: 209 KPQPPPTLPP 218
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/70 (24%), Positives = 17/70 (24%)
Frame = +2
Query: 527 PXXXXPPXXPPAXXPPXQXXXXXXXXXPPAPXXXXXXXPXXPXXXPXXXXXXXXXXXRXP 706
P PP PP PP P P P P P P
Sbjct: 153 PPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQP 212
Query: 707 PPXPPXXXXP 736
PP P P
Sbjct: 213 PPTLPPPSPP 222
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/70 (22%), Positives = 18/70 (25%)
Frame = +2
Query: 527 PXXXXPPXXPPAXXPPXQXXXXXXXXXPPAPXXXXXXXPXXPXXXPXXXXXXXXXXXRXP 706
P PP PP P + PP P P P + P
Sbjct: 154 PPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPP 213
Query: 707 PPXPPXXXXP 736
P PP P
Sbjct: 214 PTLPPPSPPP 223
>01_01_0570 - 4231100-4232560
Length = 486
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = -2
Query: 735 GXXXXGGXGGGXRXXXXXXXXXXXGXXXGXXGXXXXXXXGAGGXXXXXXXXXWXGGXXAG 556
G GG GGG G G GAGG GG AG
Sbjct: 110 GSGGFGGGGGGGVGGGVGAGFGSGGGVGAGGGLRGGGGVGAGGGGGFGGGAGGGGGIGAG 169
Query: 555 GXXGGXXXXG 526
G GG G
Sbjct: 170 GGFGGGAGAG 179
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/71 (28%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = -2
Query: 735 GXXXXGGXGGGXRXXXXXXXXXXXGXXXGXX-GXXXXXXXGAGGXXXXXXXXXWXGGXXA 559
G GG GGG G G G GAGG + GG
Sbjct: 323 GGGASGGFGGGAGIGEGVGNGFGVGAGAGTGLGSGFGWSGGAGGGFGTGGGSGFGGGLGG 382
Query: 558 GGXXGGXXXXG 526
GG GG G
Sbjct: 383 GGGIGGGLGVG 393
>06_03_1326 - 29355467-29355817
Length = 116
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = -2
Query: 735 GXXXXGGXGGGXRXXXXXXXXXXXGXXXGXXGXXXXXXXGAGGXXXXXXXXXWXGGXXAG 556
G GG GGG G G G G GG GG +G
Sbjct: 2 GGKGGGGGGGGKGGGGGGGGGKGGGGGSGGGGRSGGGGGGGGGKGGGEGGSGKYGGGYSG 61
Query: 555 GXXGGXXXXG 526
G GG G
Sbjct: 62 GHAGGGGGAG 71
>06_03_0790 - 24636805-24637770
Length = 321
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/76 (26%), Positives = 20/76 (26%)
Frame = -2
Query: 768 RGXXXXXXXXXGXXXXGGXGGGXRXXXXXXXXXXXGXXXGXXGXXXXXXXGAGGXXXXXX 589
RG G GG GGG G G G G GG
Sbjct: 75 RGWGVWSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGG 134
Query: 588 XXXWXGGXXAGGXXGG 541
GG GG GG
Sbjct: 135 GGGGGGGGGGGGGNGG 150
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = -2
Query: 735 GXXXXGGXGGGXRXXXXXXXXXXXGXXXGXXGXXXXXXXGAGGXXXXXXXXXWXGGXXAG 556
G GG GGG G G G G GG GG G
Sbjct: 78 GVWSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGG 137
Query: 555 GXXGGXXXXG 526
G GG G
Sbjct: 138 GGGGGGGGGG 147
>03_02_0765 + 11000724-11002496
Length = 590
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = -2
Query: 735 GXXXXGGXGGGXRXXXXXXXXXXXGXXXGXXGXXXXXXXGAGGXXXXXXXXXWXGGXXAG 556
G GG GGG G G G G GG GG G
Sbjct: 161 GGGLGGGAGGGLGGGAGGGGGVGGGLGGGAGGGLGSGAGGGGGLGGGAGGGGGLGGGAGG 220
Query: 555 GXXGGXXXXG 526
G GG G
Sbjct: 221 GLGGGAGGGG 230
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = -2
Query: 735 GXXXXGGXGGGXRXXXXXXXXXXXGXXXGXXGXXXXXXXGAGGXXXXXXXXXWXGGXXAG 556
G GG GGG G G G G GG GG G
Sbjct: 251 GGGLGGGAGGGGGLSGGAGGGLGGGAGAGGGGGLGGGTGGGGGLGGGTGGGGGLGGGAGG 310
Query: 555 GXXGGXXXXG 526
G GG G
Sbjct: 311 GLGGGAGAGG 320
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/87 (21%), Positives = 19/87 (21%)
Frame = +2
Query: 518 GXXPXXXXPPXXPPAXXPPXQXXXXXXXXXPPAPXXXXXXXPXXPXXXPXXXXXXXXXXX 697
G P PP PP PP PP P
Sbjct: 46 GAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQ 105
Query: 698 RXPPPXPPXXXXPXXXXXXXXXPLXXP 778
PPP PP P P P
Sbjct: 106 PPPPPPPPPSPPPSAPPPPPPPPTQPP 132
>07_03_0558 + 19461369-19462448
Length = 359
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = -2
Query: 735 GXXXXGGXGGGXRXXXXXXXXXXXGXXXGXXGXXXXXXXGAGGXXXXXXXXXWXGGXXAG 556
G GG GG G G G G GG + GG AG
Sbjct: 65 GLGGGGGGLGGGHGGGFGGGGGLGGGASGGVGGGGGFGGGGGGGLGGGQGGGFGGGAGAG 124
Query: 555 GXXGGXXXXG 526
G GG G
Sbjct: 125 GGAGGGLGGG 134
>03_01_0023 + 198414-198968
Length = 184
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = -2
Query: 720 GGXGGGXRXXXXXXXXXXXGXXXGXXGXXXXXXXGAGGXXXXXXXXXWXGGXXAGGXXGG 541
GG GGG G G G G+GG GG +GG GG
Sbjct: 38 GGGGGGGGGGGGGGRGGGGGSGGGSGGGGGSGGGGSGGGGSGGGGSGGGGGGGSGGGGGG 97
>07_03_1751 - 29215074-29216270
Length = 398
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = -2
Query: 735 GXXXXGGXGGGXRXXXXXXXXXXXGXXXGXXGXXXXXXXGAGGXXXXXXXXXWXGGXXAG 556
G G GGG G G G GAGG GG G
Sbjct: 217 GGAGGGAGGGGGLGGGAGGGHGGGGGLGGGAGGGAGVGGGAGGGAGAGGGLGAGGGAGGG 276
Query: 555 GXXGGXXXXG 526
G GG G
Sbjct: 277 GGIGGGAGGG 286
>07_03_0560 + 19479597-19480667
Length = 356
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = -2
Query: 717 GXGGGXRXXXXXXXXXXXGXXXGXXGXXXXXXXGAGGXXXXXXXXXWXGGXXAGGXXGGX 538
G GGG G G G G GG GG AGG GG
Sbjct: 100 GGGGGKGGGFGGGVGGGGGGEGGGLGGGGGGGLGGGGGGGVGGGGGQGGGFGAGGGVGGG 159
Query: 537 XXXG 526
G
Sbjct: 160 SGTG 163
>06_01_0178 + 1386981-1387505
Length = 174
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/79 (25%), Positives = 20/79 (25%)
Frame = -2
Query: 777 GXXRGXXXXXXXXXGXXXXGGXGGGXRXXXXXXXXXXXGXXXGXXGXXXXXXXGAGGXXX 598
G RG G GG GGG G G G G GG
Sbjct: 20 GRGRGGRGGRGGRGGASGGGGGGGGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGK 79
Query: 597 XXXXXXWXGGXXAGGXXGG 541
G GG GG
Sbjct: 80 GRKGGAGGHGGAGGGGGGG 98
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = +2
Query: 542 PPXXPPAXXPPXQXXXXXXXXXPPAPXXXXXXXPXXPXXXPXXXXXXXXXXXRXPPPXPP 721
P PP+ PP Q P P P P P PPP PP
Sbjct: 42 PMPGPPSQPPPPQAMYQAHPQYP-MPGSLPPPPPRPPSFAPENALPPSSPPPPSPPPPPP 100
Query: 722 XXXXP 736
P
Sbjct: 101 SSPPP 105
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +2
Query: 527 PXXXXPPXXPPAXXPPXQXXXXXXXXXPPAPXXXXXXXPXXP 652
P PP PPA PP PP P P P
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 235 HHALCSHDHSGSGVRSQVLERLEMRLRSGGGGAR 336
H A C+ D G GVR + + RLR+G G+R
Sbjct: 1373 HEAHCAQDRRGDGVRPRQIR----RLRAGEAGSR 1402
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,941,667
Number of Sequences: 37544
Number of extensions: 166716
Number of successful extensions: 1019
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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