Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_G03
         (817 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-9|AAX52465.1|  193|Drosophila melanogaster CG13376-PA p...    31   2.5  
BT003578-1|AAO39582.1|  739|Drosophila melanogaster LD24631p pro...    30   3.3  
AY119224-1|AAM51084.1|  469|Drosophila melanogaster SD16903p pro...    30   3.3  
AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-P...    30   3.3  
AY118440-1|AAM48469.1|  499|Drosophila melanogaster RH66493p pro...    30   4.4  
AE013599-1412|AAF58562.1|  499|Drosophila melanogaster CG13176-P...    30   4.4  
DQ655701-1|ABG45861.1|  813|Drosophila melanogaster JXC1 protein.      29   5.8  
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro...    29   5.8  
AY058444-1|AAL13673.1|  813|Drosophila melanogaster GH22790p pro...    29   5.8  
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA...    29   5.8  
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    29   5.8  
AE013599-1347|AAF58619.2|  813|Drosophila melanogaster CG8991-PA...    29   5.8  
X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin pr...    29   7.6  
BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p pro...    29   7.6  
AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA...    29   7.6  
AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-P...    29   7.6  

>AE014298-9|AAX52465.1|  193|Drosophila melanogaster CG13376-PA
           protein.
          Length = 193

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 674 GGTXGXGGXXXGGGGGW 624
           GG  G GG   GGGGGW
Sbjct: 170 GGAGGGGGHGGGGGGGW 186



 Score = 29.1 bits (62), Expect = 7.6
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 662 GXGGXXXGGGGGWAXWXXXGXXXXXGXG 579
           G GG   GGGGGW+     G     G G
Sbjct: 119 GGGGGHSGGGGGWSSGGGGGGWSSGGSG 146


>BT003578-1|AAO39582.1|  739|Drosophila melanogaster LD24631p
           protein.
          Length = 739

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 21/62 (33%), Positives = 24/62 (38%)
 Frame = -3

Query: 812 GXGGVRXWVXXXXRXRX*XXGWGXXGGXFX*XXXXGXXXRXXXXXXGGTXGXGGXXXGGG 633
           G GG + WV    R      G+G  G         G   R      GG+ G GG   GGG
Sbjct: 434 GSGGQQNWVQNSRRSGYDDRGYGGGGSG-----SRGYDNRNRGYA-GGSGGGGGGGGGGG 487

Query: 632 GG 627
           GG
Sbjct: 488 GG 489


>AY119224-1|AAM51084.1|  469|Drosophila melanogaster SD16903p
           protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 21/62 (33%), Positives = 24/62 (38%)
 Frame = -3

Query: 812 GXGGVRXWVXXXXRXRX*XXGWGXXGGXFX*XXXXGXXXRXXXXXXGGTXGXGGXXXGGG 633
           G GG + WV    R      G+G  G         G   R      GG+ G GG   GGG
Sbjct: 164 GSGGQQNWVQNSRRSGYDDRGYGGGGSG-----SRGYDNRNRGYA-GGSGGGGGGGGGGG 217

Query: 632 GG 627
           GG
Sbjct: 218 GG 219


>AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-PB
            protein.
          Length = 1271

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 21/62 (33%), Positives = 24/62 (38%)
 Frame = -3

Query: 812  GXGGVRXWVXXXXRXRX*XXGWGXXGGXFX*XXXXGXXXRXXXXXXGGTXGXGGXXXGGG 633
            G GG + WV    R      G+G  G         G   R      GG+ G GG   GGG
Sbjct: 967  GSGGQQNWVQNSRRSGYDDRGYGGGGSG-----SRGYDNRNRGYA-GGSGGGGGGGGGGG 1020

Query: 632  GG 627
            GG
Sbjct: 1021 GG 1022


>AY118440-1|AAM48469.1|  499|Drosophila melanogaster RH66493p
           protein.
          Length = 499

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 609 AXPXSPPPPPAXXXXPXPXGXSXVXXXPP 695
           A P  PPPPP     P P   S +   PP
Sbjct: 333 AAPPPPPPPPPPPPPPPPAQTSAIPSPPP 361


>AE013599-1412|AAF58562.1|  499|Drosophila melanogaster CG13176-PA
           protein.
          Length = 499

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 609 AXPXSPPPPPAXXXXPXPXGXSXVXXXPP 695
           A P  PPPPP     P P   S +   PP
Sbjct: 333 AAPPPPPPPPPPPPPPPPAQTSAIPSPPP 361


>DQ655701-1|ABG45861.1|  813|Drosophila melanogaster JXC1 protein.
          Length = 813

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 3/63 (4%)
 Frame = +3

Query: 624 PPPPPAXXXXPXPXGXSXVXXXP---PSXPXXXXXLXKXXSXXPPXXXLXAXPXXXXHPX 794
           PPPPP     P P G       P   P  P     L       PP   +   P     P 
Sbjct: 536 PPPPPHHFMHPPPHGMMPRGFGPHFGPPLPPQMPELGSLLGAVPPVTVMVPYPIIIPLPI 595

Query: 795 PHP 803
           P P
Sbjct: 596 PIP 598


>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
           protein.
          Length = 1458

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEM 308
           H PHH    H H+G+G   Q  E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689


>AY058444-1|AAL13673.1|  813|Drosophila melanogaster GH22790p
           protein.
          Length = 813

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 3/63 (4%)
 Frame = +3

Query: 624 PPPPPAXXXXPXPXGXSXVXXXP---PSXPXXXXXLXKXXSXXPPXXXLXAXPXXXXHPX 794
           PPPPP     P P G       P   P  P     L       PP   +   P     P 
Sbjct: 536 PPPPPHHFMHPPPHGMMPRGFGPHFGPPLPPQMPELGSLLGAVPPVTVMVPYPIIIPLPI 595

Query: 795 PHP 803
           P P
Sbjct: 596 PIP 598


>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
           isoform A protein.
          Length = 1458

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEM 308
           H PHH    H H+G+G   Q  E+L++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQL 689


>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
            isoform B protein.
          Length = 1740

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 228  HAPHHALCSHDHSGSGVRSQVLERLEM 308
            H PHH    H H+G+G   Q  E+L++
Sbjct: 945  HHPHHHPLQHPHAGAGDPRQTQEQLQL 971


>AE013599-1347|AAF58619.2|  813|Drosophila melanogaster CG8991-PA
           protein.
          Length = 813

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 3/63 (4%)
 Frame = +3

Query: 624 PPPPPAXXXXPXPXGXSXVXXXP---PSXPXXXXXLXKXXSXXPPXXXLXAXPXXXXHPX 794
           PPPPP     P P G       P   P  P     L       PP   +   P     P 
Sbjct: 536 PPPPPHHFMHPPPHGMMPRGFGPHFGPPLPPQMPELGSLLGAVPPVTVMVPYPIIIPLPI 595

Query: 795 PHP 803
           P P
Sbjct: 596 PIP 598


>X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin
           protein.
          Length = 147

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 28/96 (29%), Positives = 29/96 (30%)
 Frame = -3

Query: 662 GXGGXXXGGGGGWAXWXXXGXXXXXGXGXLXXGAXXVXXXDRXGXXRXXTDXXXFXXXXR 483
           G GG   GGGGG   +   G     G G    G       DR G               R
Sbjct: 17  GGGGGGGGGGGG---FRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGR---GGGGR 70

Query: 482 GXXXXAXXGXPXXRGGGVXVXGXGXXIWGXGGXXXG 375
           G       G    RGGG    G G    G GG   G
Sbjct: 71  GGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRG 106


>BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p
           protein.
          Length = 538

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 26/100 (26%), Positives = 28/100 (28%)
 Frame = -3

Query: 674 GGTXGXGGXXXGGGGGWAXWXXXGXXXXXGXGXLXXGAXXVXXXDRXGXXRXXTDXXXFX 495
           GG+   GG   GG GG       G     G G    GA         G          + 
Sbjct: 185 GGSGFGGGGAGGGSGGGGGGAGGGGGYGSGGGSGRGGAPGGPGAPGGGGFGGQGGGGGYG 244

Query: 494 XXXRGXXXXAXXGXPXXRGGGVXVXGXGXXIWGXGGXXXG 375
               G       G P   GGG    G G    G GG   G
Sbjct: 245 GAGGGAGRGGSPGGPGSPGGG-GFGGQGGAGGGYGGGGGG 283


>AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA
           protein.
          Length = 344

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 28/96 (29%), Positives = 29/96 (30%)
 Frame = -3

Query: 662 GXGGXXXGGGGGWAXWXXXGXXXXXGXGXLXXGAXXVXXXDRXGXXRXXTDXXXFXXXXR 483
           G GG   GGGGG   +   G     G G    G       DR G               R
Sbjct: 10  GGGGGGGGGGGG---FRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGR---GGGGR 63

Query: 482 GXXXXAXXGXPXXRGGGVXVXGXGXXIWGXGGXXXG 375
           G       G    RGGG    G G    G GG   G
Sbjct: 64  GGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRG 99


>AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-PA,
           isoform A protein.
          Length = 610

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 26/100 (26%), Positives = 28/100 (28%)
 Frame = -3

Query: 674 GGTXGXGGXXXGGGGGWAXWXXXGXXXXXGXGXLXXGAXXVXXXDRXGXXRXXTDXXXFX 495
           GG+   GG   GG GG       G     G G    GA         G          + 
Sbjct: 257 GGSGFGGGGAGGGSGGGGGGAGGGGGYGSGGGSGRGGAPGGPGAPGGGGFGGQGGGGGYG 316

Query: 494 XXXRGXXXXAXXGXPXXRGGGVXVXGXGXXIWGXGGXXXG 375
               G       G P   GGG    G G    G GG   G
Sbjct: 317 GAGGGAGRGGSPGGPGSPGGG-GFGGQGGAGGGYGGGGGG 355


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,012,333
Number of Sequences: 53049
Number of extensions: 395662
Number of successful extensions: 3863
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3389
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)