Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_F23
         (985 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0188 + 15269347-15270213                                         29   4.3  
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336...    29   5.7  

>03_03_0188 + 15269347-15270213
          Length = 288

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 22/73 (30%), Positives = 23/73 (31%)
 Frame = -3

Query: 575 GXPPPPFXXXPPPXXXXXILXXPXGXGGGFFXXXFLTXXXXXXXXXXXXXXGXXXPPPPX 396
           G P PPF   PPP     +L    G GGG     FL                   PPPP 
Sbjct: 120 GFPAPPFAAAPPPAVRPRLL---GGVGGGHQLPPFLLRPSPLKYTHSHP---TPPPPPPL 173

Query: 395 PGXEXNPPXFXGN 357
                    F GN
Sbjct: 174 HHQACTTTSFLGN 186


>06_01_0474 -
           3362734-3362827,3363179-3363366,3363458-3363700,
           3363820-3364098,3364189-3364386,3364475-3365110,
           3365209-3365463,3365579-3365685,3365770-3369566,
           3369677-3370166,3370918-3371308,3371481-3371573,
           3371687-3371810,3372544-3372791
          Length = 2380

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -3

Query: 578 GGXPPPPFXXXPPPXXXXXILXXPXGXGGG 489
           G  PPPP    PPP     +   P G GGG
Sbjct: 2   GAAPPPPGTGAPPPPPPAAV-GPPGGVGGG 30


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,470,695
Number of Sequences: 37544
Number of extensions: 300677
Number of successful extensions: 1508
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2870111300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)