Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_F18
(1057 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.7
03_02_0786 - 11169820-11170158,11170245-11170433,11171173-111714... 29 4.7
03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956 29 6.2
02_05_1277 - 35408097-35409080 29 6.2
01_01_0796 + 6190931-6192745 29 6.2
12_02_0299 - 17051570-17052474,17053542-17053755 29 8.2
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 29 8.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 8.2
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 8.2
03_05_0067 - 20460206-20460703,20461255-20461530 29 8.2
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 29 8.2
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 25 8.8
06_03_0214 + 18067945-18068463,18068940-18069839,18069918-18070652 25 8.9
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 709 PPPPPPXXXXXXXFXXXAPPPP 774
PPPPPP F PPPP
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPP 569
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 710 PPPPPXXXXXXXFFXXXPXPPPP 778
PPPPP F P PPPP
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPP 571
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 709 PPPPPPXXXXXXXFXXXAPPPP 774
PPPPPP + PPPP
Sbjct: 567 PPPPPPPPLPQSNYASSQPPPP 588
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +1
Query: 682 PXXXFXLXXPPPPPPXXXXXXXFXXXAPPPP 774
P + PPPPPP PPPP
Sbjct: 576 PQSNYASSQPPPPPPPPPLPNCLVPSPPPPP 606
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 709 PPPPPPXXXXXXXFXXXAPPPPXL 780
PPPPPP PPPP L
Sbjct: 604 PPPPPPPILPNRSVPPPPPPPPPL 627
>03_02_0786 -
11169820-11170158,11170245-11170433,11171173-11171469,
11171568-11171630,11171884-11171997,11173011-11173091,
11173176-11173307,11174265-11174363,11174453-11174530,
11174641-11174901
Length = 550
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 709 PPPPPPXXXXXXXFXXXAPPPP 774
PPPPPP + PPPP
Sbjct: 36 PPPPPPMPPVPVMYLRGVPPPP 57
>03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956
Length = 397
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 709 PPPPPPXXXXXXXFXXXAPPPPXLFF 786
PPPPPP PPPP F
Sbjct: 361 PPPPPPVYYSSYVMLDRPPPPPPQLF 386
>02_05_1277 - 35408097-35409080
Length = 327
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 709 PPPPPPXXXXXXXFXXXAPPPP 774
PPPPPP APPPP
Sbjct: 62 PPPPPPAQPPVLAAPAPAPPPP 83
>01_01_0796 + 6190931-6192745
Length = 604
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 694 FXLXXPPPPPPXXXXXXXFXXXAPPPP 774
F PPPPPP + PPPP
Sbjct: 232 FVADQPPPPPPPAAGGSLWIPELPPPP 258
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 680 PPXXXFXXXXPPPPPXXXXXXXFFXXXPXPPPP 778
PP F PP P F+ P PPPP
Sbjct: 294 PPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPP 326
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 680 PPXXXFXXXXPPPPPXXXXXXXFFXXXPXPPPP 778
PP PPPPP P PPPP
Sbjct: 421 PPPAPSQQPQPPPPPSHPTPITSVAPAPPPPPP 453
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 709 PPPPPPXXXXXXXFXXXAPPPP 774
PPPPPP APPPP
Sbjct: 122 PPPPPPPTQPPPREAQLAPPPP 143
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 709 PPPPPPXXXXXXXFXXXAPPPPXL 780
PPPPPP PPPP L
Sbjct: 72 PPPPPPAPRPPRRHHRIPPPPPPL 95
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 711 PPPPPXXXXXXXFXXXXPXPPXPFFXXFLSPXXXXXXPXPXXXXPPXLXXG 863
PPPPP F P PP +F P P P PP G
Sbjct: 14 PPPPPQY-----FQAGPPPPPPQYFQGAHPPAAMWGQPPPPQAAPPPAPAG 59
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 709 PPPPPPXXXXXXXFXXXAPPPPXLFFXXFY 798
PPPPPP PPPP F Y
Sbjct: 112 PPPPPPHLLHYYGHPPPPPPPPPPFKGDHY 141
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 25.0 bits (52), Expect(2) = 8.8
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +1
Query: 709 PPPPPPXXXXXXXFXXXAPPP 771
PPPPPP F + PP
Sbjct: 55 PPPPPPPPAPFFPFLPDSAPP 75
Score = 21.8 bits (44), Expect(2) = 8.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 700 LXXPPPPPP 726
L PPPPPP
Sbjct: 54 LPPPPPPPP 62
>06_03_0214 + 18067945-18068463,18068940-18069839,18069918-18070652
Length = 717
Score = 25.0 bits (52), Expect(2) = 8.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 709 PPPPPPXXXXXXXFXXXAPP 768
PPPPPP F PP
Sbjct: 246 PPPPPPQHSKLAEFLRICPP 265
Score = 21.8 bits (44), Expect(2) = 8.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 700 LXXPPPPPP 726
L PPPPPP
Sbjct: 202 LPPPPPPPP 210
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,164,545
Number of Sequences: 37544
Number of extensions: 331717
Number of successful extensions: 4700
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3489
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3129488528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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