Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_F16
(1178 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 2.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.8
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 8.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 8.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 8.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 8.4
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 29 8.4
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 8.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 8.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 8.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 8.4
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 937 PPPPPPPPXXXXXXXXXXXGXXXXXPPPP 851
PPPPPPPP PPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPP 637
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 938 PPPPPPPPXXXXXXXXXXXXXXXXXPPPPP 849
PPPPPPPP PPPPP
Sbjct: 631 PPPPPPPP---MGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 937 PPPPPPPPXXXXXXXXXXXGXXXXXPPPP 851
PPPPPPPP PPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPP 463
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 938 PPPPPPPPXXXXXXXXXXXXXXXXXPPPPP 849
PPPPPPPP PPPPP
Sbjct: 457 PPPPPPPP---MGLPAVGAGAPPPPPPPPP 483
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 937 PPPPPPPPXXXXXXXXXXXGXXXXXPPPP 851
PPPPPPPP PPPP
Sbjct: 26 PPPPPPPPKPAPYVEQSAQPQQTAPPPPP 54
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 937 PPPPPPPPXXXXXXXXXXXGXXXXXPPPP 851
PPPPPPP G PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 937 PPPPPPPPXXXXXXXXXXXGXXXXXPPPP 851
PPPPPPP G PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 937 PPPPPPPPXXXXXXXXXXXGXXXXXPPPP 851
PPPPPPP G PPPP
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 850 GGGGGXXXXXXXXXXXXXXXXXGGGGGGGG 939
GGGGG GGGGGGGG
Sbjct: 103 GGGGGCGGGGGGGCGGGGGGGCGGGGGGGG 132
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Frame = -1
Query: 938 PPPPPPPP--XXXXXXXXXXXXXXXXXPPPPP 849
PPPPPPPP PPPPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Frame = -1
Query: 938 PPPPPPPP--XXXXXXXXXXXXXXXXXPPPPP 849
PPPPPPPP PPPPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 938 PPPPPPPPXXXXXXXXXXXXXXXXXPPPPP 849
PPPPPPPP PPPPP
Sbjct: 297 PPPPPPPP----GRTPGPPGMPGMPPPPPP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 938 PPPPPPPPXXXXXXXXXXXXXXXXXPPPPP 849
PPPPPPPP PPPPP
Sbjct: 307 PPPPPPPP----GRTPGPPGMPGMPPPPPP 332
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 8.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 671 PPPPXXXXXKKXXPPPPP 618
PPPP K PPPPP
Sbjct: 160 PPPPVSVPSSKPTPPPPP 177
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 8.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 671 PPPPXXXXXKKXXPPPPP 618
PPPP K PPPPP
Sbjct: 160 PPPPVSVPSSKPTPPPPP 177
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 850 GGGGGXXXXXXXXXXXXXXXXXGGGGGGGG 939
GGGGG GGGGGGGG
Sbjct: 241 GGGGGGGQSNNNSSFSSVPAFNGGGGGGGG 270
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 850 GGGGGXXXXXXXXXXXXXXXXXGGGGGGGG 939
GGGGG GGGGGGGG
Sbjct: 235 GGGGGRDRDRGGWGGGGGGRGYGGGGGGGG 264
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 938 PPPPPPPPXXXXXXXXXXXXXXXXXPPPPP 849
PPPPPPPP PPPPP
Sbjct: 68 PPPPPPPP----LISILQQAPPPPPPPPPP 93
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 850 GGGGGXXXXXXXXXXXXXXXXXGGGGGGGG 939
GGGGG GGGGGGGG
Sbjct: 100 GGGGGYGGGHGGGHGGAVGGGYGGGGGGGG 129
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 938 PPPPPPPPXXXXXXXXXXXXXXXXXPPPPP 849
PPPPPPPP PPPPP
Sbjct: 1338 PPPPPPPP----PPPSDDLTPVPPPPPPPP 1363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,842,726
Number of Sequences: 27780
Number of extensions: 340875
Number of successful extensions: 8066
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2667
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3224247522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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