Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_F13
(1143 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25286-1|AAA58429.1| 1388|Homo sapiens alpha-1 type XV collagen ... 34 1.1
L25280-1|AAC78500.1| 1388|Homo sapiens type XV collagen protein. 34 1.1
AL354923-1|CAI12548.2| 1388|Homo sapiens collagen type XV alpha ... 34 1.1
AL136084-3|CAI17044.2| 1388|Homo sapiens collagen type XV alpha ... 34 1.1
M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein. 33 1.5
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 33 1.5
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 33 1.5
D88587-1|BAA32277.1| 299|Homo sapiens Hakata antigen protein. 33 1.5
CR456808-1|CAG33089.1| 299|Homo sapiens FCN3 protein. 33 1.5
BC020731-1|AAH20731.1| 288|Homo sapiens ficolin (collagen/fibri... 33 1.5
AY756173-1|AAU85296.1| 299|Homo sapiens ficolin (collagen/fibri... 33 1.5
AY358283-1|AAQ88650.1| 288|Homo sapiens NL3 protein. 33 1.5
AL663123-2|CAI14775.1| 288|Homo sapiens ficolin (collagen/fibri... 33 1.5
AL663123-1|CAI14774.1| 299|Homo sapiens ficolin (collagen/fibri... 33 1.5
AK075140-1|BAC11429.1| 288|Homo sapiens protein ( Homo sapiens ... 33 1.5
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 30 1.9
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 30 1.9
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 30 1.9
Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein. 32 3.4
BC083495-1|AAH83495.1| 388|Homo sapiens COL14A1 protein protein. 32 3.4
BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein. 32 3.4
X98568-1|CAA67178.1| 680|Homo sapiens type X collagen protein. 32 4.5
X72579-1|CAA51170.1| 680|Homo sapiens collagen X protein. 32 4.5
X65120-1|CAA46236.1| 629|Homo sapiens alpha1(X)collagen protein. 32 4.5
X60382-1|CAA42933.1| 680|Homo sapiens collagen subunit (alpha-... 32 4.5
BC130623-1|AAI30624.1| 680|Homo sapiens collagen, type X, alpha... 32 4.5
BC130621-1|AAI30622.1| 680|Homo sapiens collagen, type X, alpha... 32 4.5
AL121963-4|CAB87590.1| 680|Homo sapiens collagen type X alpha 1... 32 4.5
AL121963-3|CAI19530.2| 216|Homo sapiens collagen type X alpha 1... 32 4.5
X57527-1|CAA40748.1| 744|Homo sapiens alpha 1(VIII) collagen pr... 31 7.8
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 31 7.8
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 31 7.8
BT009917-1|AAP88919.1| 744|Homo sapiens collagen, type VIII, al... 31 7.8
BC013581-1|AAH13581.1| 744|Homo sapiens collagen, type VIII, al... 31 7.8
BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein. 31 7.8
AY550974-1|AAT52220.1| 745|Homo sapiens cell proliferation-indu... 31 7.8
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 31 7.8
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 31 7.8
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 31 7.8
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 31 7.8
>L25286-1|AAA58429.1| 1388|Homo sapiens alpha-1 type XV collagen
protein.
Length = 1388
Score = 33.9 bits (74), Expect = 1.1
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +3
Query: 81 GPPLWKGGEXPXLMKXPGAPGPXNPXXPKGPPXXL 185
GPP G P PG PGP P P GPP L
Sbjct: 1076 GPPGAPGLPGPPGFGRPGDPGPPGPPGPPGPPAIL 1110
>L25280-1|AAC78500.1| 1388|Homo sapiens type XV collagen protein.
Length = 1388
Score = 33.9 bits (74), Expect = 1.1
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +3
Query: 81 GPPLWKGGEXPXLMKXPGAPGPXNPXXPKGPPXXL 185
GPP G P PG PGP P P GPP L
Sbjct: 1076 GPPGAPGLPGPPGFGRPGDPGPPGPPGPPGPPAIL 1110
>AL354923-1|CAI12548.2| 1388|Homo sapiens collagen type XV alpha 1
protein.
Length = 1388
Score = 33.9 bits (74), Expect = 1.1
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +3
Query: 81 GPPLWKGGEXPXLMKXPGAPGPXNPXXPKGPPXXL 185
GPP G P PG PGP P P GPP L
Sbjct: 1076 GPPGAPGLPGPPGFGRPGDPGPPGPPGPPGPPAIL 1110
>AL136084-3|CAI17044.2| 1388|Homo sapiens collagen type XV alpha 1
protein.
Length = 1388
Score = 33.9 bits (74), Expect = 1.1
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +3
Query: 81 GPPLWKGGEXPXLMKXPGAPGPXNPXXPKGPPXXL 185
GPP G P PG PGP P P GPP L
Sbjct: 1076 GPPGAPGLPGPPGFGRPGDPGPPGPPGPPGPPAIL 1110
>M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein.
Length = 625
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 78 GGPPLWKGGEXPXLMKXPGAPGPXNPXXPKGP 173
G P GGE P L G PGP P P+GP
Sbjct: 536 GAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGP 567
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 78 GGPPLWKGGEXPXLMKXPGAPGPXNPXXPKGP 173
G P GGE P L G PGP P P+GP
Sbjct: 1350 GAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGP 1381
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 78 GGPPLWKGGEXPXLMKXPGAPGPXNPXXPKGP 173
G P GGE P L G PGP P P+GP
Sbjct: 1350 GAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGP 1381
>D88587-1|BAA32277.1| 299|Homo sapiens Hakata antigen protein.
Length = 299
Score = 33.5 bits (73), Expect = 1.5
Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Frame = +3
Query: 12 PXXWXLKXXTPGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAP------GPXNPXXPKGP 173
P W L P L P C GP + + L PGAP G P P GP
Sbjct: 8 PSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGP 67
Query: 174 PXXLXXXG 197
P + G
Sbjct: 68 PGKMGPKG 75
>CR456808-1|CAG33089.1| 299|Homo sapiens FCN3 protein.
Length = 299
Score = 33.5 bits (73), Expect = 1.5
Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Frame = +3
Query: 12 PXXWXLKXXTPGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAP------GPXNPXXPKGP 173
P W L P L P C GP + + L PGAP G P P GP
Sbjct: 8 PSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGP 67
Query: 174 PXXLXXXG 197
P + G
Sbjct: 68 PGKMGPKG 75
>BC020731-1|AAH20731.1| 288|Homo sapiens ficolin
(collagen/fibrinogen domain containing) 3 (Hakata
antigen) protein.
Length = 288
Score = 33.5 bits (73), Expect = 1.5
Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Frame = +3
Query: 12 PXXWXLKXXTPGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAP------GPXNPXXPKGP 173
P W L P L P C GP + + L PGAP G P P GP
Sbjct: 8 PSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGP 67
Query: 174 PXXLXXXG 197
P + G
Sbjct: 68 PGKMGPKG 75
>AY756173-1|AAU85296.1| 299|Homo sapiens ficolin
(collagen/fibrinogen domain containing) 3 (Hakata
antigen) protein.
Length = 299
Score = 33.5 bits (73), Expect = 1.5
Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Frame = +3
Query: 12 PXXWXLKXXTPGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAP------GPXNPXXPKGP 173
P W L P L P C GP + + L PGAP G P P GP
Sbjct: 8 PSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGP 67
Query: 174 PXXLXXXG 197
P + G
Sbjct: 68 PGKMGPKG 75
>AY358283-1|AAQ88650.1| 288|Homo sapiens NL3 protein.
Length = 288
Score = 33.5 bits (73), Expect = 1.5
Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Frame = +3
Query: 12 PXXWXLKXXTPGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAP------GPXNPXXPKGP 173
P W L P L P C GP + + L PGAP G P P GP
Sbjct: 8 PSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGP 67
Query: 174 PXXLXXXG 197
P + G
Sbjct: 68 PGKMGPKG 75
>AL663123-2|CAI14775.1| 288|Homo sapiens ficolin
(collagen/fibrinogen domain containing) 35A) pseudogene
protein.
Length = 288
Score = 33.5 bits (73), Expect = 1.5
Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Frame = +3
Query: 12 PXXWXLKXXTPGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAP------GPXNPXXPKGP 173
P W L P L P C GP + + L PGAP G P P GP
Sbjct: 8 PSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGP 67
Query: 174 PXXLXXXG 197
P + G
Sbjct: 68 PGKMGPKG 75
>AL663123-1|CAI14774.1| 299|Homo sapiens ficolin
(collagen/fibrinogen domain containing) 3Dent disease)
protein.
Length = 299
Score = 33.5 bits (73), Expect = 1.5
Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Frame = +3
Query: 12 PXXWXLKXXTPGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAP------GPXNPXXPKGP 173
P W L P L P C GP + + L PGAP G P P GP
Sbjct: 8 PSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGP 67
Query: 174 PXXLXXXG 197
P + G
Sbjct: 68 PGKMGPKG 75
>AK075140-1|BAC11429.1| 288|Homo sapiens protein ( Homo sapiens
cDNA FLJ90659 fis, clone PLACE1004816, highly similar to
Ficolin 3 precursor. ).
Length = 288
Score = 33.5 bits (73), Expect = 1.5
Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Frame = +3
Query: 12 PXXWXLKXXTPGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAP------GPXNPXXPKGP 173
P W L P L P C GP + + L PGAP G P P GP
Sbjct: 8 PSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGP 67
Query: 174 PXXLXXXG 197
P + G
Sbjct: 68 PGKMGPKG 75
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 30.3 bits (65), Expect(2) = 1.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 129 PGAPGPXNPXXPKGPP 176
PG PGP P P+GPP
Sbjct: 1249 PGPPGPPGPPGPRGPP 1264
Score = 21.4 bits (43), Expect(2) = 1.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 90 LWKGGEXPXLMKXPGAPGP 146
L +G E ++ PG PGP
Sbjct: 1202 LLRGSEFRGIVGPPGPPGP 1220
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.3 bits (65), Expect(2) = 1.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 129 PGAPGPXNPXXPKGPP 176
PG PGP P P+GPP
Sbjct: 1214 PGPPGPPGPPGPRGPP 1229
Score = 21.4 bits (43), Expect(2) = 1.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 90 LWKGGEXPXLMKXPGAPGP 146
L +G E ++ PG PGP
Sbjct: 1167 LLRGSEFRGIVGPPGPPGP 1185
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 30.3 bits (65), Expect(2) = 1.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 129 PGAPGPXNPXXPKGPP 176
PG PGP P P+GPP
Sbjct: 1214 PGPPGPPGPPGPRGPP 1229
Score = 21.4 bits (43), Expect(2) = 1.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 90 LWKGGEXPXLMKXPGAPGP 146
L +G E ++ PG PGP
Sbjct: 1167 LLRGSEFRGIVGPPGPPGP 1185
>Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein.
Length = 755
Score = 32.3 bits (70), Expect = 3.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 81 GPPLWKGGEXPXLMKXPGAPGPXNPXXPKGPPXXLXXXG 197
GPP G P PG+PGP P+GPP L G
Sbjct: 688 GPP---GPAGPSGESRPGSPGPPGSPGPRGPPGHLGVPG 723
>BC083495-1|AAH83495.1| 388|Homo sapiens COL14A1 protein protein.
Length = 388
Score = 32.3 bits (70), Expect = 3.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 81 GPPLWKGGEXPXLMKXPGAPGPXNPXXPKGPPXXLXXXG 197
GPP G P PG+PGP P+GPP L G
Sbjct: 305 GPP---GPAGPSGESRPGSPGPPGSPGPRGPPGHLGVPG 340
>BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein.
Length = 759
Score = 32.3 bits (70), Expect = 3.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 81 GPPLWKGGEXPXLMKXPGAPGPXNPXXPKGPPXXLXXXG 197
GPP G P PG+PGP P+GPP L G
Sbjct: 676 GPP---GPAGPSGESRPGSPGPPGSPGPRGPPGHLGVPG 711
>X98568-1|CAA67178.1| 680|Homo sapiens type X collagen protein.
Length = 680
Score = 31.9 bits (69), Expect = 4.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 42 PGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAPGPXNP 155
PG P P GPP G P L PG PGP P
Sbjct: 65 PGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGP 102
>X72579-1|CAA51170.1| 680|Homo sapiens collagen X protein.
Length = 680
Score = 31.9 bits (69), Expect = 4.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 42 PGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAPGPXNP 155
PG P P GPP G P L PG PGP P
Sbjct: 65 PGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGP 102
>X65120-1|CAA46236.1| 629|Homo sapiens alpha1(X)collagen protein.
Length = 629
Score = 31.9 bits (69), Expect = 4.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 42 PGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAPGPXNP 155
PG P P GPP G P L PG PGP P
Sbjct: 14 PGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGP 51
>X60382-1|CAA42933.1| 680|Homo sapiens collagen subunit (alpha-1
(X)) 3 protein.
Length = 680
Score = 31.9 bits (69), Expect = 4.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 42 PGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAPGPXNP 155
PG P P GPP G P L PG PGP P
Sbjct: 65 PGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGP 102
>BC130623-1|AAI30624.1| 680|Homo sapiens collagen, type X, alpha
1(Schmid metaphyseal chondrodysplasia) protein.
Length = 680
Score = 31.9 bits (69), Expect = 4.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 42 PGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAPGPXNP 155
PG P P GPP G P L PG PGP P
Sbjct: 65 PGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGP 102
>BC130621-1|AAI30622.1| 680|Homo sapiens collagen, type X, alpha
1(Schmid metaphyseal chondrodysplasia) protein.
Length = 680
Score = 31.9 bits (69), Expect = 4.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 42 PGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAPGPXNP 155
PG P P GPP G P L PG PGP P
Sbjct: 65 PGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGP 102
>AL121963-4|CAB87590.1| 680|Homo sapiens collagen type X alpha 1
protein.
Length = 680
Score = 31.9 bits (69), Expect = 4.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 42 PGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAPGPXNP 155
PG P P GPP G P L PG PGP P
Sbjct: 65 PGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGP 102
>AL121963-3|CAI19530.2| 216|Homo sapiens collagen type X alpha 1
protein.
Length = 216
Score = 31.9 bits (69), Expect = 4.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 42 PGGLXPXYXPFCGGPPLWKGGEXPXLMKXPGAPGPXNP 155
PG P P GPP G P L PG PGP P
Sbjct: 65 PGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGP 102
>X57527-1|CAA40748.1| 744|Homo sapiens alpha 1(VIII) collagen
protein.
Length = 744
Score = 31.1 bits (67), Expect = 7.8
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 81 GPPLWKGGEXPXLMKXPGAPGPXNPXXPKGPP 176
GPP G P PG PGP P P GPP
Sbjct: 542 GPPGKPGALGP--QGQPGLPGPPGPPGPPGPP 571
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 31.1 bits (67), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 45 GGLXPXYXPFCGGPPLWKGGEXPXLMKX-PGAPGPXNPXXPKGPP 176
G + P P GP +G P + PG+PGP P P GPP
Sbjct: 1423 GPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPP 1467
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 31.1 bits (67), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 45 GGLXPXYXPFCGGPPLWKGGEXPXLMKX-PGAPGPXNPXXPKGPP 176
G + P P GP +G P + PG+PGP P P GPP
Sbjct: 1423 GPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPP 1467
>BT009917-1|AAP88919.1| 744|Homo sapiens collagen, type VIII, alpha
1 protein.
Length = 744
Score = 31.1 bits (67), Expect = 7.8
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 81 GPPLWKGGEXPXLMKXPGAPGPXNPXXPKGPP 176
GPP G P PG PGP P P GPP
Sbjct: 542 GPPGKPGALGP--QGQPGLPGPPGPPGPPGPP 571
>BC013581-1|AAH13581.1| 744|Homo sapiens collagen, type VIII, alpha
1 protein.
Length = 744
Score = 31.1 bits (67), Expect = 7.8
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 81 GPPLWKGGEXPXLMKXPGAPGPXNPXXPKGPP 176
GPP G P PG PGP P P GPP
Sbjct: 542 GPPGKPGALGP--QGQPGLPGPPGPPGPPGPP 571
>BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein.
Length = 591
Score = 31.1 bits (67), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 45 GGLXPXYXPFCGGPPLWKGGEXPXLMKX-PGAPGPXNPXXPKGPP 176
G + P P GP +G P + PG+PGP P P GPP
Sbjct: 176 GPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPP 220
>AY550974-1|AAT52220.1| 745|Homo sapiens cell
proliferation-inducing protein 41 protein.
Length = 745
Score = 31.1 bits (67), Expect = 7.8
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 81 GPPLWKGGEXPXLMKXPGAPGPXNPXXPKGPP 176
GPP G P PG PGP P P GPP
Sbjct: 543 GPPGKPGALGP--QGQPGLPGPPGPPGPPGPP 572
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.1 bits (67), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 45 GGLXPXYXPFCGGPPLWKGGEXPXLMKX-PGAPGPXNPXXPKGPP 176
G + P P GP +G P + PG+PGP P P GPP
Sbjct: 1423 GPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPP 1467
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.1 bits (67), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 45 GGLXPXYXPFCGGPPLWKGGEXPXLMKX-PGAPGPXNPXXPKGPP 176
G + P P GP +G P + PG+PGP P P GPP
Sbjct: 1423 GPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPP 1467
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.1 bits (67), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 45 GGLXPXYXPFCGGPPLWKGGEXPXLMKX-PGAPGPXNPXXPKGPP 176
G + P P GP +G P + PG+PGP P P GPP
Sbjct: 1423 GPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPP 1467
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V collagen
variant protein.
Length = 1792
Score = 31.1 bits (67), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 45 GGLXPXYXPFCGGPPLWKGGEXPXLMKX-PGAPGPXNPXXPKGPP 176
G + P P GP +G P + PG+PGP P P GPP
Sbjct: 1377 GPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPP 1421
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,845,965
Number of Sequences: 237096
Number of extensions: 2431323
Number of successful extensions: 9063
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8241
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15976881214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -