Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_F03
(1039 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.14
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.14
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.14
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.33
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.58
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.58
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.58
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 32 0.58
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.77
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 32 0.77
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 32 0.77
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.0
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.0
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.0
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.4
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 31 1.4
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 1.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 1.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 3.1
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.1
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 5.4
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 7.2
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 7.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.5
L23648-3|AAN63386.1| 438|Caenorhabditis elegans Cyclin t protei... 28 9.5
L23648-2|AAN63387.1| 183|Caenorhabditis elegans Cyclin t protei... 28 9.5
L23648-1|AAA28034.1| 468|Caenorhabditis elegans Cyclin t protei... 28 9.5
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 28 9.5
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 28 9.5
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 28 9.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.14
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP PPPP GG K P P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGF---KGGPPPPPP 789
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Frame = +3
Query: 519 PPPPPPXXXXPP----PPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP PP PP GG P P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Frame = +3
Query: 519 PPPPPPXXXXP----PPPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP P PPP GG P P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +3
Query: 519 PPPP--PPXXXXPPPPXXGGG 575
PPPP PP PPPP GG
Sbjct: 714 PPPPGLPPITGGPPPPPPPGG 734
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.14
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP PPPP GG K P P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGF---KGGPPPPPP 789
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Frame = +3
Query: 519 PPPPPPXXXXPP----PPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP PP PP GG P P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Frame = +3
Query: 519 PPPPPPXXXXP----PPPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP P PPP GG P P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +3
Query: 519 PPPP--PPXXXXPPPPXXGGG 575
PPPP PP PPPP GG
Sbjct: 714 PPPPGLPPITGGPPPPPPPGG 734
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.14
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP PPPP GG K P P P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGF---KGGPPPPPP 372
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Frame = +3
Query: 519 PPPPPPXXXXPP----PPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP PP PP GG P P P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Frame = +3
Query: 519 PPPPPPXXXXP----PPPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP P PPP GG P P P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +3
Query: 519 PPPP--PPXXXXPPPPXXGGG 575
PPPP PP PPPP GG
Sbjct: 297 PPPPGLPPITGGPPPPPPPGG 317
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.33
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGG 578
PPPPPP PPPP GG
Sbjct: 579 PPPPPPMLGGPPPPPPPPGG 598
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXGGGG 579
PPPPP PPPP GG
Sbjct: 579 PPPPPPMLGGPPPPPPPPGG 598
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Frame = +3
Query: 519 PPPPPP---XXXXPPPPXXGG 572
PPPPPP PPPP GG
Sbjct: 578 PPPPPPPMLGGPPPPPPPPGG 598
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.58
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPPP PPPP GG + P P P
Sbjct: 272 PPPPPTGSPPPPP---AGGSPPPPRAGSPPPPP 301
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 525 PPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPP PPPP GG P P P
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 255 PPPPPAAGSPPPPRTG 270
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 6/40 (15%)
Frame = +3
Query: 519 PPPPPPXXXXPP------PPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP PP PP G + P P P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Frame = +3
Query: 519 PPPPPPXXXXPP----PPXXGGGGGXXXKKXXXPXP 614
PPPPPP PP PP GG P P
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.58
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPPP PPPP GG + P P P
Sbjct: 293 PPPPPTGSPPPPP---AGGSPPPPRAGSPPPPP 322
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 525 PPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPP PPPP GG P P P
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 276 PPPPPAAGSPPPPRTG 291
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 6/40 (15%)
Frame = +3
Query: 519 PPPPPPXXXXPP------PPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP PP PP G + P P P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Frame = +3
Query: 519 PPPPPPXXXXPP----PPXXGGGGGXXXKKXXXPXP 614
PPPPPP PP PP GG P P
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.58
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPPP PPPP GG + P P P
Sbjct: 278 PPPPPTGSPPPPP---AGGSPPPPRAGSPPPPP 307
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 525 PPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPP PPPP GG P P P
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 261 PPPPPAAGSPPPPRTG 276
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 6/40 (15%)
Frame = +3
Query: 519 PPPPPPXXXXPP------PPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP PP PP G + P P P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Frame = +3
Query: 519 PPPPPPXXXXPP----PPXXGGGGGXXXKKXXXPXP 614
PPPPPP PP PP GG P P
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.58
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 617 GXXGXXXFFXXXPPPPPXXGGGGXXXXXGGGGG 519
G G + PP P GGGG GGGGG
Sbjct: 302 GGPGTDAAYCPCPPRTPAGGGGGGDFPAGGGGG 334
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -3
Query: 581 PPPPPXXGG--GGXXXXXGGGGG 519
PPPPP GG GG GGGGG
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGG 77
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 581 PPPPPXXGGGGXXXXXGGGGG 519
PPPPP GGG GG GG
Sbjct: 54 PPPPPPACGGGCGGGGGGCGG 74
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 581 PPPPPXXGGGGXXXXXGGGGG 519
PPPPP GGG GG GG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGG 131
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 581 PPPPPXXGGGGXXXXXGGGGG 519
PPPPP GGG G GGG
Sbjct: 112 PPPPPACGGGCGGGGGGCGGG 132
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
P PPP PPP GGGGG P P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTP 820
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
P PPP PPP GGGGG P P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTP 820
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGG 581
P PPP PPP GGGGG
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGG 807
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXGGGGG 582
P PP PPP GGGGG
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGG 807
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP P PP GG P P P
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 790 PPPPPLGIIPPPPPPG 805
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGG 581
P PPP PPP GGGGG
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGG 807
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXGGGGG 582
P PP PPP GGGGG
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGG 807
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP P PP GG P P P
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 790 PPPPPLGIIPPPPPPG 805
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGG 575
PPPP P PPPP GG
Sbjct: 75 PPPPGPGGIPPPPPMFAGG 93
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXGGGG 579
PPPPP PPPP G G
Sbjct: 105 PPPPPMFGAPPPPPPPSGLG 124
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGG 578
PPPPP PPPP G G
Sbjct: 105 PPPPPMFGAPPPPPPPSGLG 124
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXGG 572
PPP P PPPP GG
Sbjct: 66 PPPVPNGFIPPPPGPGG 82
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.1 bits (67), Expect = 1.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXGGG 575
PPPPP PP P GGG
Sbjct: 34 PPPPPACAPPPAPACGGG 51
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 525 PPPPXXXXPPPPXXGGGGGXXXKKXXXPXP 614
PPPP PPP GGG P P
Sbjct: 34 PPPPPACAPPPAPACGGGAPPPPAYAAPAP 63
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 357 PPPPPPPPPPPPPP 370
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGG 581
PPPPPP P P GGG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGG 322
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 581 PPPPPXXGG-GGXXXXXGGGGG 519
PPP P GG GG GGGGG
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGG 71
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 581 PPPPPXXGG-GGXXXXXGGGGG 519
PPP P GG GG GGGGG
Sbjct: 74 PPPAPCGGGCGGGGGGCGGGGG 95
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGG 581
PPPPPP P P GGG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGG 322
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 581 PPPPPXXGG-GGXXXXXGGGGG 519
PPP P GG GG GGGGG
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGG 71
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 581 PPPPPXXGG-GGXXXXXGGGGG 519
PPP P GG GG GGGGG
Sbjct: 74 PPPAPCGGGCGGGGGGCGGGGG 95
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 132 PPPPPPPPHYPPPP 145
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 133 PPPPPPPHYPPPPP 146
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 65 PPPPPPPPMCPPPP 78
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 66 PPPPPPPMCPPPPP 79
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 67 PPPPPPMCPPPPPP 80
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 72 PPPPPPPMPCPPPP 85
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 73 PPPPPPMPCPPPPP 86
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 2 PPPPPPPPPPPPPP 15
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 3 PPPPPPPPPPPPPP 16
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 4 PPPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 2 PPPPPPPPPPPPPP 15
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 3 PPPPPPPPPPPPPP 16
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PPPPPPXXXXPPPP 560
PPPPPP PPPP
Sbjct: 4 PPPPPPPPPPPPPP 17
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPPPP PPP G K P P P
Sbjct: 87 PPPPPPPTLKAPPPPPILGLKTPSKSLKTPTPRP 120
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +3
Query: 519 PPPPPP---XXXXPPPPXXGGGGGXXXKKXXXPXP--XPXXXXKKKKKK 650
PPPPPP PPPP G K P P P KK+KK
Sbjct: 86 PPPPPPPPTLKAPPPPPILGLKTPSKSLKTPTPRPKECPTSFLPKKEKK 134
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXGGGGGXXKKKXXXPXXP 618
PPPPP PPPP G +++ P P
Sbjct: 96 PPPPPHYYTQPPPPPQSGYYHHQQQQHSGPTTP 128
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGG 572
PPPPP PPPP G
Sbjct: 96 PPPPPHYYTQPPPPPQSG 113
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGG 575
PPPPPP PPP G
Sbjct: 95 PPPPPPHYYTQPPPPPQSG 113
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGGG 581
PPPPPP PPPP G G G
Sbjct: 51 PPPPPP----PPPPMCGCGCG 67
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXGGGGGXXKK 594
PPPPP PPPP G G G K+
Sbjct: 51 PPPPPP----PPPPMCGCGCGRKKR 71
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 33 PPPPPKGTGTPPPPPTG 49
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXG 570
PPPPP PPPP G
Sbjct: 33 PPPPPKGTGTPPPPPTG 49
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 64 PPPPPKGTGTPPPPPTG 80
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXG 570
PPPPP PPPP G
Sbjct: 64 PPPPPKGTGTPPPPPTG 80
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 96 PPPPPKGTGTPPPPPTG 112
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXG 570
PPPPP PPPP G
Sbjct: 96 PPPPPKGTGTPPPPPTG 112
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 127 PPPPPKGTGSPPPPPTG 143
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXG 570
PPPPP PPPP G
Sbjct: 127 PPPPPKGTGSPPPPPTG 143
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 158 PPPPPKGTGSPPPPPTG 174
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXG 570
PPPPP PPPP G
Sbjct: 158 PPPPPKGTGSPPPPPTG 174
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 189 PPPPPKGTGTPPPPPTG 205
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXG 570
PPPPP PPPP G
Sbjct: 189 PPPPPKGTGTPPPPPTG 205
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXG 569
PPPPP PPPP G
Sbjct: 251 PPPPPKGTGSPPPPPTG 267
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 520 PPPPPXXXXXPPPPXXG 570
PPPPP PPPP G
Sbjct: 251 PPPPPKGTGSPPPPPTG 267
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGG 578
PPPPPP PP P GG G
Sbjct: 63 PPPPPP----PPAPIGGGAG 78
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXGGGGG 581
PPPPP PPP GGG G
Sbjct: 63 PPPPP----PPPAPIGGGAG 78
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGGG 578
PPPPPP PP P GG G
Sbjct: 63 PPPPPP----PPAPIGGGAG 78
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 522 PPPPPXXXXPPPPXXGGGGG 581
PPPPP PPP GGG G
Sbjct: 63 PPPPP----PPPAPIGGGAG 78
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Frame = +3
Query: 519 PPPPPP--XXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPPP PPPP G G P P P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Frame = +3
Query: 519 PPPPPP--XXXXPPPPXXGGGGGXXXKKXXXPXPXP 620
PPPPP PPPP G G P P P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
>L23648-3|AAN63386.1| 438|Caenorhabditis elegans Cyclin t protein
1.1, isoform b protein.
Length = 438
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGG 575
PPP PP PPPP G
Sbjct: 388 PPPIPPQLNFPPPPIVSSG 406
>L23648-2|AAN63387.1| 183|Caenorhabditis elegans Cyclin t protein
1.1, isoform c protein.
Length = 183
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGG 575
PPP PP PPPP G
Sbjct: 103 PPPIPPQLNFPPPPIVSSG 121
>L23648-1|AAA28034.1| 468|Caenorhabditis elegans Cyclin t protein
1.1, isoform a protein.
Length = 468
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 519 PPPPPPXXXXPPPPXXGGG 575
PPP PP PPPP G
Sbjct: 388 PPPIPPQLNFPPPPIVSSG 406
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 581 PPPPPXXGGGGXXXXXGGGGG 519
PPPPP GG G GG G
Sbjct: 156 PPPPPLMGGSGGHWRSGGERG 176
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 5/25 (20%)
Frame = +3
Query: 522 PPPPPXXXXPPP-----PXXGGGGG 581
PPPPP PPP GGGGG
Sbjct: 1322 PPPPPMIRGPPPDQMYRDRSGGGGG 1346
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 5/25 (20%)
Frame = +3
Query: 522 PPPPPXXXXPPP-----PXXGGGGG 581
PPPPP PPP GGGGG
Sbjct: 1322 PPPPPMIRGPPPDQMYRDRSGGGGG 1346
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.153 0.548
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,898,565
Number of Sequences: 27780
Number of extensions: 200372
Number of successful extensions: 3419
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2053
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2751568594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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