Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_F02
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.86 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   6.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 0.86
 Identities = 19/55 (34%), Positives = 19/55 (34%)
 Frame = +1

Query: 589 PXGXPXAPXAQXXXXXXXPPXPPPXPXXXPNXXXPXNLXXXASLXPIPXHPPFXN 753
           P G P  P AQ       PP PPP P   P    P  L       P    PP  N
Sbjct: 570 PAGFPNLPNAQ------PPPAPPPPPPMGP---PPSPLAGGPLGGPAGSRPPLPN 615


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = -3

Query: 776 GVGXSGXXXXNGGWXGXGXRXAXXXRXXGXXXLGXXXGXGGGXGG 642
           G G        GG  G G R     R  G        G GGG  G
Sbjct: 56  GYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYG 100



 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 619 GRGGRXGXXGGR 584
           GRGGR G  GGR
Sbjct: 68  GRGGRGGRGGGR 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,866
Number of Sequences: 2352
Number of extensions: 5603
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)