Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_E12
         (1280 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p pro...    30   5.9  
AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA...    30   5.9  

>AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p
           protein.
          Length = 362

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = -2

Query: 175 GFSQXGXPPGPXAFX*XXXXPPLXRXGGX---PPKXAXNPGGEPPXR 44
           GF+  G PP    +      PP+    G    PP+   N GG PP R
Sbjct: 170 GFNGGGPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPPPPR 216


>AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA
           protein.
          Length = 362

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = -2

Query: 175 GFSQXGXPPGPXAFX*XXXXPPLXRXGGX---PPKXAXNPGGEPPXR 44
           GF+  G PP    +      PP+    G    PP+   N GG PP R
Sbjct: 170 GFNGGGPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPPPPR 216


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.157    0.548 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,113,263
Number of Sequences: 53049
Number of extensions: 425618
Number of successful extensions: 2248
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2159
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6906482595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)