Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_E10
         (775 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   141   6e-34
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   134   1e-31
12_02_1033 - 25552157-25552732,25553050-25553505,25553608-255536...    30   2.3  
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663...    29   3.1  
10_02_0192 + 6517985-6518348,6518647-6518699,6519984-6520021,652...    29   5.4  

>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  141 bits (341), Expect = 6e-34
 Identities = 63/91 (69%), Positives = 73/91 (80%)
 Frame = -1

Query: 388 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEK 209
           A TE+D +EK ITPMGGFPHYG V  D++MIKGCC+GPKKR++TLR+SL   T R ALE+
Sbjct: 298 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357

Query: 208 INLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
           I LKFIDTSSKFGHGRFQT  +K  F G LK
Sbjct: 358 IKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 473 YHHRTEMNQKXIVLDRNPQK 414
           YHHRTEMN+K   + ++ Q+
Sbjct: 275 YHHRTEMNKKVYKIGKSGQE 294


>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  134 bits (323), Expect = 1e-31
 Identities = 59/83 (71%), Positives = 69/83 (83%)
 Frame = -1

Query: 388 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEK 209
           A TE+D +EK ITPMGGFPHYG V  D++MIKGCC+GPKKR++TLR+SL   T R ALE+
Sbjct: 298 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357

Query: 208 INLKFIDTSSKFGHGRFQTPADK 140
           I LKFIDTSSKFGHGRFQT  +K
Sbjct: 358 IKLKFIDTSSKFGHGRFQTTDEK 380



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 473 YHHRTEMNQKXIVLDRNPQK 414
           YHHRTEMN+K   + ++ Q+
Sbjct: 275 YHHRTEMNKKVYKIGKSGQE 294


>12_02_1033 -
           25552157-25552732,25553050-25553505,25553608-25553659,
           25553758-25553831,25553968-25554017,25554106-25554187,
           25554265-25554314,25554405-25554447,25554544-25554624,
           25554723-25554768,25554860-25554906,25554998-25555063,
           25555334-25555400,25555528-25555613
          Length = 591

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -2

Query: 180 PSSVMVDSRRRLTRLHSWVHSRRIVFAKKLRLPQPQRGCCAALSVVRE 37
           PS V+  +RRR+ R +S  + R + F+K    P P+R   ++   ++E
Sbjct: 292 PSDVVDSARRRMARRNSLGNERTVTFSK----PSPERNSVSSTRSIKE 335


>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
            30366541-30366849,30367544-30370567,30370640-30372290,
            30372373-30373463,30373544-30373646,30373737-30374439,
            30374654-30375783,30375913-30376027,30376504-30376695,
            30377443-30377616,30378438-30378494,30378581-30378716,
            30378842-30378927,30379023-30379092,30379993-30380021,
            30380444-30380456,30380762-30381006
          Length = 3582

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 373  DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 278
            D +  + +P+GG P YG ++ D  +   C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402


>10_02_0192 +
           6517985-6518348,6518647-6518699,6519984-6520021,
           6522332-6522717,6523752-6523822,6524620-6524732,
           6525019-6525337,6525576-6525886,6526493-6527069,
           6530483-6530538,6531643-6532126
          Length = 923

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -2

Query: 165 VDSRRRLTRLHSWVHSRRIVFAKKLRLPQPQRGCCAALSVVRE 37
           V S  RL RL  W  +      + LRL  P+R C  A+ VV E
Sbjct: 11  VSSWPRLPRLPPWPCASHAQRRRVLRLLPPRRRCAGAVRVVAE 53


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,530,704
Number of Sequences: 37544
Number of extensions: 385983
Number of successful extensions: 808
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)