Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_E10
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 152 2e-37
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 152 2e-37
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 152 2e-37
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 152 2e-37
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 152 2e-37
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 152 2e-37
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 152 2e-37
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 152 2e-37
AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical ... 28 8.5
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 28 8.5
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 28 8.5
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 28 8.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 152 bits (369), Expect = 2e-37
Identities = 70/103 (67%), Positives = 84/103 (81%)
Frame = -1
Query: 397 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 218
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 217 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 152 bits (369), Expect = 2e-37
Identities = 70/103 (67%), Positives = 84/103 (81%)
Frame = -1
Query: 397 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 218
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 217 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 152 bits (369), Expect = 2e-37
Identities = 70/103 (67%), Positives = 84/103 (81%)
Frame = -1
Query: 397 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 218
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 217 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 152 bits (369), Expect = 2e-37
Identities = 70/103 (67%), Positives = 84/103 (81%)
Frame = -1
Query: 397 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 218
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 217 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 152 bits (369), Expect = 2e-37
Identities = 70/103 (67%), Positives = 84/103 (81%)
Frame = -1
Query: 397 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 218
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 217 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 152 bits (369), Expect = 2e-37
Identities = 70/103 (67%), Positives = 84/103 (81%)
Frame = -1
Query: 397 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 218
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 217 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 152 bits (369), Expect = 2e-37
Identities = 70/103 (67%), Positives = 84/103 (81%)
Frame = -1
Query: 397 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 218
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 217 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 152 bits (369), Expect = 2e-37
Identities = 70/103 (67%), Positives = 84/103 (81%)
Frame = -1
Query: 397 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 218
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 217 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
>AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical
protein R02D3.7 protein.
Length = 479
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = -2
Query: 153 RRLTRLHSWVHS--RRIVFA----KKLRLPQPQRGCCAALSVVRENKHLTMQKK 10
R +T++H+W + ++ A KK R CC + R KHL KK
Sbjct: 32 RHMTQIHNWTTEDCQELIAAIKSEKKSRASSTSFVCCHCRMIFRSVKHLVQHKK 85
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 155 LESTMTELGRGVNEFEVDLF*CSPLCMHTQRLSKSNDTLFRSHAATLDHHKVVVYFTIMG 334
L+ + + G +N + C L + +L K++ T+ H + + +V+ +
Sbjct: 35 LKIVVDQSGASINTLSIHPVTCWSLGILDSQLVKTSFTITTDHGKSSNIERVM---KVQT 91
Query: 335 ETSHRCNGFLRQIILSRCIVFNNFAILFVDSCPIRXISGSFQY 463
TS + G LR +SRC VFN F V + + I+ +F++
Sbjct: 92 STSVKI-GSLR---ISRCDVFNLFGPDLVKNVAVDNITPNFKF 130
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 155 LESTMTELGRGVNEFEVDLF*CSPLCMHTQRLSKSNDTLFRSHAATLDHHKVVVYFTIMG 334
L+ + + G +N + C L + +L K++ T+ H + + +V+ +
Sbjct: 35 LKIVVDQSGASINTLSIHPVTCWSLGILDSQLVKTSFTITTDHGKSSNIERVM---KVQT 91
Query: 335 ETSHRCNGFLRQIILSRCIVFNNFAILFVDSCPIRXISGSFQY 463
TS + G LR +SRC VFN F V + + I+ +F++
Sbjct: 92 STSVKI-GSLR---ISRCDVFNLFGPDLVKNVAVDNITPNFKF 130
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/103 (24%), Positives = 48/103 (46%)
Frame = +2
Query: 155 LESTMTELGRGVNEFEVDLF*CSPLCMHTQRLSKSNDTLFRSHAATLDHHKVVVYFTIMG 334
L+ + + G +N + C L + +L K++ T+ H + + +V+ +
Sbjct: 35 LKIVVDQSGASINTLSIHPVTCWSLGILDSQLVKTSFTITTDHGKSSNIERVM---KVQT 91
Query: 335 ETSHRCNGFLRQIILSRCIVFNNFAILFVDSCPIRXISGSFQY 463
TS + G LR +SRC VFN F V + + I+ +F++
Sbjct: 92 STSVKI-GSLR---ISRCDVFNLFGPDLVKNVAVDNITPNFKF 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,156,314
Number of Sequences: 27780
Number of extensions: 345661
Number of successful extensions: 843
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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