Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_E08
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.073
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.073
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.073
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.29
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.29
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.29
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 32 0.39
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.51
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 31 1.2
Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 30 1.6
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 30 1.6
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 30 1.6
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 30 1.6
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 30 1.6
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 2.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 2.1
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 2.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 6.3
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.4
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP GG PP PPPP PPPPP
Sbjct: 86 PPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPPXF 545
PPP G PP PPPP PPPPP F
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP G PP PPP PPPPP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPP 99
Score = 31.5 bits (68), Expect = 0.68
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 598 FXPPPPXXXXXPPPPPXF 545
F PPPP PPPPP F
Sbjct: 73 FIPPPPGPGGIPPPPPMF 90
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP + G PP PPPP P PP
Sbjct: 97 PPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP GG PP PPPP PPPPP
Sbjct: 743 PPPPPPGGLPPISGGPP--PPPPPPGGCPPPPPP 774
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPP---PPXXXXXPPPPP 551
PPP GG PP PP PP PPPPP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP GG PP PPP PPPPP
Sbjct: 760 PPPPPPGGCPPPPPP-----PPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP GG PP PPPP PPPPP
Sbjct: 743 PPPPPPGGLPPISGGPP--PPPPPPGGCPPPPPP 774
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPP---PPXXXXXPPPPP 551
PPP GG PP PP PP PPPPP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP GG PP PPP PPPPP
Sbjct: 760 PPPPPPGGCPPPPPP-----PPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP GG PP PPPP PPPPP
Sbjct: 326 PPPPPPGGLPPISGGPP--PPPPPPGGCPPPPPP 357
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPP---PPXXXXXPPPPP 551
PPP GG PP PP PP PPPPP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP GG PP PPP PPPPP
Sbjct: 343 PPPPPPGGCPPPPPP-----PPPGGFKGGPPPPP 371
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPPXFFFFXXXGXGGXXXXXP 497
PPP G PP P PP PPPPP F G GG P
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP-SRFGPPGMGGMPPPPP 338
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFF--XPPPPXXXXXPPPPP 551
PPP + PP PPPP PPPPP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 301
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP PP F PPPP PPPPP
Sbjct: 40 PPPL---PCPPPPICPPQFCPPPPMCPPPPPPPP 70
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP P PPPP PPPPP
Sbjct: 47 PPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPPXFFFFXXXGXGGXXXXXP 497
PPP G PP P PP PPPPP F G GG P
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP-SRFGPPGMGGMPPPPP 348
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFF--XPPPPXXXXXPPPPP 551
PPP + PP PPPP PPPPP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 311
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 649 PPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPPXF 545
PP + G PP F PPP PPPPP F
Sbjct: 34 PPIVIAGPPPC-----FDCPPPAPIFVAPPPPPCF 63
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP G PP PPPP PPPPP
Sbjct: 272 PPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPP 302
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 649 PPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPP 554
PP G PP PPPP PPPP
Sbjct: 247 PPLAGSGSPPPPPAAG--SPPPPRTGSPPPPP 276
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPP 554
PPP G PP PPPP PPPP
Sbjct: 238 PPPPPPKGSPPLAGSGS---PPPPPAAGSPPPP 267
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPP----PPP 551
PPP GG PP PPPP PP PPP
Sbjct: 280 PPPPPAGGSPPPPRAGS--PPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP G PP PPPP PPPPP
Sbjct: 293 PPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPP 323
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 649 PPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPP 554
PP G PP PPPP PPPP
Sbjct: 268 PPLAGSGSPPPPPAAG--SPPPPRTGSPPPPP 297
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPP 554
PPP G PP PPPP PPPP
Sbjct: 259 PPPPPPKGSPPLAGSGS---PPPPPAAGSPPPP 288
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPP----PPP 551
PPP GG PP PPPP PP PPP
Sbjct: 301 PPPPPAGGSPPPPRAGS--PPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP G PP PPPP PPPPP
Sbjct: 278 PPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPP 308
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 649 PPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPP 554
PP G PP PPPP PPPP
Sbjct: 253 PPLAGSGSPPPPPAAG--SPPPPRTGSPPPPP 282
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPP 554
PPP G PP PPPP PPPP
Sbjct: 244 PPPPPPKGSPPLAGSGS---PPPPPAAGSPPPP 273
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPP----PPP 551
PPP GG PP PPPP PP PPP
Sbjct: 286 PPPPPAGGSPPPPRAGS--PPPPPPPRGSPPTGSLPPP 321
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 646 PFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPPXFF 542
PF+ GG PP + PPP PPPPP ++
Sbjct: 72 PFM-GGPPPHHQYHLQY--PPPHGLGPPPPPPHYY 103
>Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical
protein Y57G11C.24e protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP + PPPP PPPPP
Sbjct: 448 PPPLVSDAGVQVEIRREHVAPPPPPVVIPPPPPP 481
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP + PPPP PPPPP
Sbjct: 628 PPPLVSDAGVQVEIRREHVAPPPPPVVIPPPPPP 661
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP + PPPP PPPPP
Sbjct: 645 PPPLVSDAGVQVEIRREHVAPPPPPVVIPPPPPP 678
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP + PPPP PPPPP
Sbjct: 700 PPPLVSDAGVQVEIRREHVAPPPPPVVIPPPPPP 733
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP + PPPP PPPPP
Sbjct: 700 PPPLVSDAGVQVEIRREHVAPPPPPVVIPPPPPP 733
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP P PPPP PPPPP
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP P PPPP PPPPP
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPP 554
P P PP F PPPP PPPP
Sbjct: 46 PMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPP 78
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP PP PPPP PPPPP
Sbjct: 57 PPPCPAQFCPPPPICPP---PPPPPMPCPPPPPP 87
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/76 (27%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXF-FXPPPPXXXXXPPPPPXFFFFXXXGXGGXXXXXPXKXXXXX 476
P P GG PP F PPP PP F G GG P
Sbjct: 359 PSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPG 418
Query: 475 KKXKXXPPPXKKGXXG 428
PP G G
Sbjct: 419 APGSYGPPQGGPGGFG 434
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPP----PPPXFFFF 536
PP F+ G PP F PPPP PP PPP F
Sbjct: 308 PPHFMGRGMPPP------FMPPPPHFGMGPPRGFMPPPHPMMF 344
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPP----PPPXFFFF 536
PP F+ G PP F PPPP PP PPP F
Sbjct: 308 PPHFMGRGMPPP------FMPPPPHFGMGPPRGFMPPPHPMMF 344
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -3
Query: 652 PPPF---LXGGXPPXXXXXXFFXPPPPXXXXXPPPPP 551
PPP L G PP PPPP PPPPP
Sbjct: 565 PPPLPQNLSGAPPPPP-------PPPPMLGGPPPPPP 594
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 592 PPPPXXXXXPPPPPXF 545
PPPP PPPPP +
Sbjct: 133 PPPPPPPHYPPPPPHY 148
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 625 PPXXXXXXFFXPPPPXXXXXPPPPPXF 545
PP + PPPP P PPP F
Sbjct: 109 PPWMRGPWWRRPPPPWGPPPPGPPPPF 135
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 649 PPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPP 554
PP L GG PP P PP PPPP
Sbjct: 1585 PPPLMGGPPPRLGMP---PPGPPPPNGGPPPP 1613
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -3
Query: 652 PPPFLXGGXPPXXXXXXFFXPPPPXXXXXPPPPPXFFFFXXXGXGG 515
PPPF G P PPPP PPP F G GG
Sbjct: 757 PPPFGRGAGPMSSF------PPPPRGGMHHMPPPPSFRGGRGGHGG 796
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,401,596
Number of Sequences: 27780
Number of extensions: 155969
Number of successful extensions: 1030
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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