Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_E07
         (722 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-33...    31   1.2  
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895...    29   2.8  
11_04_0370 + 16891334-16891469,16891556-16891707,16893277-168936...    29   3.7  
09_05_0012 - 20063456-20064601                                         29   4.9  

>01_01_0047 +
           334809-334877,334966-335074,335159-335299,336337-336498,
           336577-336734,337180-337310,337385-337472,337587-337690,
           338346-338444,339060-339116,339262-339337,339519-339602,
           339969-340010,340128-340198,341516-341564,342370-342441,
           343149-343286,343393-343473,344166-344353,344591-345188,
           345274-345342,346729-346854,347048-347175,347986-348142,
           348342-348388,348472-348535,348691-348765,349292-349414,
           349797-349982,351179-351303,351390-351459,351974-352101,
           352585-352726,353065-353163,353239-353285,353598-353652,
           353758-353967,354686-354757,354836-354905,355231-355414,
           355521-355644,355732-355863,356252-356317,356805-356852,
           357572-357676,357728-357865,358097-358399,358482-358594,
           359082-359148,359236-359310,359395-359517,359610-359618,
           360156-360320,360401-360502,361545-361696,361794-361995,
           362079-362126,362215-362298,362613-362657,363302-363385,
           363890-363970,364044-364133,364217-364279,364824-364841,
           365238-365378,365494-365550,366091-366185,366275-366383,
           367067-367156,367308-367387,367480-367558,367742-367903,
           368005-368136,368335-368469,368553-368618,369317-369457,
           369575-369648,369685-369910
          Length = 2905

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 166 ILYSLTWRRVNIARSQAVLLEKCRHLDSS 252
           +LY+L  + VNI   QA+LLE C ++ +S
Sbjct: 827 VLYNLADKEVNIKVGQAILLELCTNISAS 855


>03_05_1112 +
           30488678-30488806,30489047-30489228,30489310-30489505,
           30490095-30491117
          Length = 509

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +1

Query: 127 SANFLFKWSIN-GCILYSLTWRRVNIARSQAVLLEKCRHLDSSRKRSYDIWAEKPG 291
           S+N LF W +N G   ++LT    N++   A  ++ C    SS   +  IW  + G
Sbjct: 290 SSNKLFVWEVNGGRPRHTLTGHTKNVSSVDASWVKSCVLASSSNDHTIKIWDLQSG 345


>11_04_0370 +
           16891334-16891469,16891556-16891707,16893277-16893639,
           16893832-16893929,16893983-16896029
          Length = 931

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = -1

Query: 245 SRCLHFSNNTACDLAMLTRRQVK----LYKIQPLIDHLNKKFAELYNLGQNLA 99
           S C+    +T CD+ + TR +      L+K    ++H N   A L  +GQ +A
Sbjct: 226 SLCMPIFASTRCDIIVTTRSEAVASWLLFKQTAFVEHDNVSPANLVEIGQRIA 278


>09_05_0012 - 20063456-20064601
          Length = 381

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 182 VKLYKIQPLIDHLNKKFAELYNLGQNLAVDES 87
           ++ +  QP  DH N   A  YN+GQN  V E+
Sbjct: 319 IQYWAFQPNPDHANFAGASSYNVGQNPGVHEA 350


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,335,648
Number of Sequences: 37544
Number of extensions: 221742
Number of successful extensions: 450
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)