Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_E05
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical p...    29   4.9  
U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical ...    28   6.4  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   8.5  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   8.5  
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    28   8.5  

>U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical
           protein B0336.3 protein.
          Length = 719

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 22/74 (29%), Positives = 33/74 (44%)
 Frame = -3

Query: 676 PGSSNPRFXTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 497
           P S+ P   + T PDL         P      PG++   SS +PSA     S  + K +S
Sbjct: 80  PASTAPTSASATAPDLKKEKAPAEKPSKPTAPPGVQK--SSSSPSA-SKAESRPLRKRIS 136

Query: 496 PPYFQVNDESQASR 455
           PP  +  ++ + SR
Sbjct: 137 PPPSENREKEKQSR 150


>U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical
           protein F59A3.2b protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = -3

Query: 661 PRFXTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAP-SAYLTPSSLGMXKGVSPPYF 485
           PR     TP L  + I+P+     +F P + PP    +P  A   P++L      S P  
Sbjct: 525 PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNT 584

Query: 484 QVNDESQASRLISR 443
            V ++      ++R
Sbjct: 585 YVPNQESFDESVNR 598


>U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical
           protein F59A3.2a protein.
          Length = 975

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = -3

Query: 661 PRFXTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAP-SAYLTPSSLGMXKGVSPPYF 485
           PR     TP L  + I+P+     +F P + PP    +P  A   P++L      S P  
Sbjct: 525 PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNT 584

Query: 484 QVNDESQASRLISR 443
            V ++      ++R
Sbjct: 585 YVPNQESFDESVNR 598


>AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical
           protein F49F1.1 protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -3

Query: 661 PRFXTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPS 542
           P   T  TP+LT++++ P+T   K     + P  +++ P+
Sbjct: 174 PLVLTTLTPELTTVTVEPITSTLKPTTTTITPTTTTKLPT 213


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 565  PLSSEAPSAYLTPSSLGMXKGVSPP 491
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 565  PLSSEAPSAYLTPSSLGMXKGVSPP 491
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
           protein Y53C10A.10 protein.
          Length = 1582

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 22/84 (26%), Positives = 36/84 (42%)
 Frame = -3

Query: 679 QPGSSNPRFXTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 500
           +PG+S+    +PT  D +  S    T   +     ++   SS +PS + TP  +G    V
Sbjct: 709 RPGTSSTATDSPTMDDTSKTS----TVTSEGTTLSIESTESSASPSDFTTPDFIGFTSSV 764

Query: 499 SPPYFQVNDESQASRLISRHSTHT 428
           S    Q +  S +S   +   T T
Sbjct: 765 SRTSEQYSSSSPSSDTTTMDVTST 788


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,672,202
Number of Sequences: 27780
Number of extensions: 304992
Number of successful extensions: 887
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)