Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_E02
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.24
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.24
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 1.3
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 1.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.3
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 29 3.0
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 29 3.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 3.0
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.2
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 9.1
U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical p... 28 9.1
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 28 9.1
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 28 9.1
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 23 9.9
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +1
Query: 616 PPAGPPXXXPXPXHPTXXSSPXDXXRPPXGXPXXXXXXNSATPXRRTPXPXXXXXXXXXX 795
PP PP P P +P RPP P RTP P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP---PGMPGMP 317
Query: 796 PPPPP 810
PPPPP
Sbjct: 318 PPPPP 322
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 560 PAPXXGXXXXXPXVSXXSXLRPXPPXLXLSPXTPPXXAPPP-TXPGP 697
P P P + + P PP S PP PPP PGP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 310
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +1
Query: 616 PPAGPPXXXPXPXHPTXXSSPXDXXRPPXGXPXXXXXXNSATPXRRTPXPXXXXXXXXXX 795
PP PP P P +P RPP P RTP P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP---PGMPGMP 327
Query: 796 PPPPP 810
PPPPP
Sbjct: 328 PPPPP 332
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 560 PAPXXGXXXXXPXVSXXSXLRPXPPXLXLSPXTPPXXAPPP-TXPGP 697
P P P + + P PP S PP PPP PGP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 320
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 0.98
Identities = 22/64 (34%), Positives = 24/64 (37%)
Frame = +1
Query: 619 PAGPPXXXPXPXHPTXXSSPXDXXRPPXGXPXXXXXXNSATPXRRTPXPXXXXXXXXXXP 798
P+ PP P P P+ SP D PP G P P RR P P P
Sbjct: 223 PSEPPS--PGPVDPSDEPSPSDPPGPP-GPP--------GPPTRRPPGPPGPPTRRPPGP 271
Query: 799 PPPP 810
P PP
Sbjct: 272 PGPP 275
Score = 29.9 bits (64), Expect = 2.3
Identities = 33/151 (21%), Positives = 40/151 (26%)
Frame = +1
Query: 358 PSPXSXXPTX*XQCXSPXXXIXXRAXXPXPXPTXPKXAXXPTXXAHSPEXASGXXGPGXG 537
PSP P+ Q + P P P P P+ SG PG
Sbjct: 122 PSPGPVDPSEDPQPSVEPSEDHQPSGPPSPGPVDPSEDPQPSVEPSEDPQPSGPPSPGPV 181
Query: 538 XTGXLXXPRXXXRXXXXXXXXLXXVXPPAGPPXXXPXPXHPTXXSSPXDXXRPPXGXPXX 717
P P+GPP P P P+ P + PP P
Sbjct: 182 DPSEDPQPSGSSSPGPVDPSD---EPSPSGPPS--PGPVDPSEDPKPSE---PPSPGPVD 233
Query: 718 XXXXNSATPXRRTPXPXXXXXXXXXXPPPPP 810
S + P P PP PP
Sbjct: 234 PSDEPSPSDPPGPPGPPGPPTRRPPGPPGPP 264
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/76 (26%), Positives = 23/76 (30%)
Frame = +2
Query: 452 PPXQXXXXXPPXXPIVPXXHPGXRXXGXXXLGTSXXPAPXXGXXXXXPXVSXXSXLRPXP 631
PP PP P P P + S P P P S +
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKPTIR-PPPIPASPPPRPPASEPVGIPLYSEKQHQQQLR 134
Query: 632 PXLXLSPXTPPXXAPP 679
P +SP PP APP
Sbjct: 135 PTTAVSPPKPPSFAPP 150
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/76 (26%), Positives = 23/76 (30%)
Frame = +2
Query: 452 PPXQXXXXXPPXXPIVPXXHPGXRXXGXXXLGTSXXPAPXXGXXXXXPXVSXXSXLRPXP 631
PP PP P P P + S P P P S +
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKPTIR-PPPIPASPPPRPPASEPVGIPLYSEKQHQQQLR 356
Query: 632 PXLXLSPXTPPXXAPP 679
P +SP PP APP
Sbjct: 357 PTTAVSPPKPPSFAPP 372
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = -2
Query: 809 GGGGGXXIXXXXXXXGXGVRRXGVAEXXXXXLCGXPXGGRXXSXGELSXVGXSGXGXXXG 630
GGGGG G G G A CG GG G G G G G
Sbjct: 86 GGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCG--GGCGGGGGGGCGG 143
Query: 629 GPAGG 615
G GG
Sbjct: 144 GGGGG 148
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/104 (24%), Positives = 30/104 (28%), Gaps = 6/104 (5%)
Frame = +2
Query: 452 PPXQXXXXXPPXXPIVPXXHPGXRXXGXXXLGTSXXPAPXXGXXXXXPXVSXXSXLRPXP 631
PP PP P + P G T P P P +S P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP--PGGLPPISGGPPPPPPP 764
Query: 632 PXLXLSPXTPPXXA------PPPTXPGPXXEXRXXVXXXIPPXR 745
P P PP PPP PG + +PP +
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +1
Query: 616 PPAGPPXXXPXPXHPTXXSSPXDXXRPPXGXPXXXXXXNSATPXRRTPXPXXXXXXXXXX 795
PP PP P P P PP P S P P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP---PPPPPPPGGCPPPP 772
Query: 796 PPPPP 810
PPPPP
Sbjct: 773 PPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/104 (24%), Positives = 30/104 (28%), Gaps = 6/104 (5%)
Frame = +2
Query: 452 PPXQXXXXXPPXXPIVPXXHPGXRXXGXXXLGTSXXPAPXXGXXXXXPXVSXXSXLRPXP 631
PP PP P + P G T P P P +S P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP--PGGLPPISGGPPPPPPP 764
Query: 632 PXLXLSPXTPPXXA------PPPTXPGPXXEXRXXVXXXIPPXR 745
P P PP PPP PG + +PP +
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +1
Query: 616 PPAGPPXXXPXPXHPTXXSSPXDXXRPPXGXPXXXXXXNSATPXRRTPXPXXXXXXXXXX 795
PP PP P P P PP P S P P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP---PPPPPPPGGCPPPP 772
Query: 796 PPPPP 810
PPPPP
Sbjct: 773 PPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/104 (24%), Positives = 30/104 (28%), Gaps = 6/104 (5%)
Frame = +2
Query: 452 PPXQXXXXXPPXXPIVPXXHPGXRXXGXXXLGTSXXPAPXXGXXXXXPXVSXXSXLRPXP 631
PP PP P + P G T P P P +S P P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP--PGGLPPISGGPPPPPPP 347
Query: 632 PXLXLSPXTPPXXA------PPPTXPGPXXEXRXXVXXXIPPXR 745
P P PP PPP PG + +PP +
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 391
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +1
Query: 616 PPAGPPXXXPXPXHPTXXSSPXDXXRPPXGXPXXXXXXNSATPXRRTPXPXXXXXXXXXX 795
PP PP P P P PP P S P P P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP---PPPPPPPGGCPPPP 355
Query: 796 PPPPP 810
PPPPP
Sbjct: 356 PPPPP 360
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +1
Query: 628 PPXXXPXPXHPTXXSSPXDXXRPPXGXPXXXXXXNSATPXRRTPXPXXXXXXXXXXPPPP 807
PP P P P+ +P PP P + P P P PPPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPP---PPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
Query: 808 P 810
P
Sbjct: 1395 P 1395
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 620 RPXPPXLXLSPXTPPXXAPPPTXPGP 697
RP P L P T P PPP P P
Sbjct: 233 RPRPTTRRLPPPTTPPPPPPPPAPSP 258
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 620 RPXPPXLXLSPXTPPXXAPPPTXPGP 697
RP P L P T P PPP P P
Sbjct: 231 RPRPTTRRLPPPTTPPPPPPPPAPSP 256
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 593 PXVSXXSXLRPXPPXLXLSPXTPPXXAPPPTXP 691
P S P PP P TPP +PPP P
Sbjct: 128 PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRP 160
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 623 PXPPXLXLSPXTPPXXAPPPTXPGPXXE 706
P PP P TP PPP P P E
Sbjct: 126 PNPPRTCCPPPTPAAPPPPPPPPPPAPE 153
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -3
Query: 763 GXGXGXPXWRNXXGNXXAXLXXGAGXSRXGSXLGWGXRGXGXXRG 629
G G G P W G G G G WG G G G
Sbjct: 47 GWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGG 91
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Frame = +1
Query: 616 PPAG-PPXXXPXPXHPTXXSSPXDXXRPPXGXPXXXXXXNSATPXRRTPXP----XXXXX 780
PPAG PP P P S P G P + P +P P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 781 XXXXXPPPPP 810
PPPPP
Sbjct: 292 PRAGSPPPPP 301
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 623 PXPPXLXLSPXTPPXXAPPPTXPGPXXEXRXXVXXXIPPXRXAXP 757
P PP P P PPP G R PP R + P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Frame = +1
Query: 616 PPAG-PPXXXPXPXHPTXXSSPXDXXRPPXGXPXXXXXXNSATPXRRTPXP----XXXXX 780
PPAG PP P P S P G P + P +P P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 781 XXXXXPPPPP 810
PPPPP
Sbjct: 313 PRAGSPPPPP 322
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 623 PXPPXLXLSPXTPPXXAPPPTXPGPXXEXRXXVXXXIPPXRXAXP 757
P PP P P PPP G R PP R + P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Frame = +1
Query: 616 PPAG-PPXXXPXPXHPTXXSSPXDXXRPPXGXPXXXXXXNSATPXRRTPXP----XXXXX 780
PPAG PP P P S P G P + P +P P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 781 XXXXXPPPPP 810
PPPPP
Sbjct: 298 PRAGSPPPPP 307
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 623 PXPPXLXLSPXTPPXXAPPPTXPGPXXEXRXXVXXXIPPXRXAXP 757
P PP P P PPP G R PP R + P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +2
Query: 560 PAPXXGXXXXXPXVSXXSXLRPXPPXLXLSPXTPPXXAPPPTXPGPXXE 706
P P P + PP L P P PPP P P E
Sbjct: 467 PPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALE 515
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +2
Query: 560 PAPXXGXXXXXPXVSXXSXLRPXPPXLXLSPXTPPXXAPPPTXPGP 697
P P G P + + P PP + P PP PP P P
Sbjct: 76 PPPGPGGIPPPPPM-FAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical
protein F26A1.12 protein.
Length = 231
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 623 PXPPXLXLSPXTPPXXAPPPTXPGP 697
P PP P PP PPPT P P
Sbjct: 48 PRPPRPN-RPPRPPPATPPPTTPAP 71
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +2
Query: 563 APXXGXXXXXPXVSXXSXLRPXPPXLXLSPXTPPXXAPPPTXP 691
AP P V+ + PP +P PP PPP P
Sbjct: 760 APGSPRLPPKPSVAQTIAMHSAPPSPLTAPIPPPPPPPPPMLP 802
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +2
Query: 563 APXXGXXXXXPXVSXXSXLRPXPPXLXLSPXTPPXXAPPPTXP 691
AP P V+ + PP +P PP PPP P
Sbjct: 659 APGSPRLPPKPSVAQTIAMHSAPPSPLTAPIPPPPPPPPPMLP 701
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 23.0 bits (47), Expect(2) = 9.9
Identities = 10/34 (29%), Positives = 13/34 (38%)
Frame = +1
Query: 445 PXPTXPKXAXXPTXXAHSPEXASGXXGPGXGXTG 546
P P+ P A P+ P+ S GP G
Sbjct: 55 PDPSSPPPAPRPSGQPPGPQGPSDLPGPSGAPPG 88
Score = 23.0 bits (47), Expect(2) = 9.9
Identities = 13/43 (30%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +1
Query: 619 PAGPPXXXPXPXHPTXXSSPXDXXRP-PXGXPXXXXXXNSATP 744
P+G P P P P P RP P P +S P
Sbjct: 82 PSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRPSRSPHSDAP 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,450,076
Number of Sequences: 27780
Number of extensions: 180983
Number of successful extensions: 1142
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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