Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_D23
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    60   1e-09
U53342-5|AAA96217.1|  178|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical ...    29   2.8  
AC087079-1|AAK27872.1|  402|Caenorhabditis elegans Hypothetical ...    29   3.7  
U40061-3|AAO91697.1|  205|Caenorhabditis elegans Claudin-like in...    29   5.0  
U40061-2|AAA81150.1|  222|Caenorhabditis elegans Claudin-like in...    29   5.0  
U23523-8|AAC46563.1|   87|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine recept...    28   8.7  
U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine recept...    28   8.7  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
 Frame = -2

Query: 578 AIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGESIKESIMDGVGVLFKKRSDANADEA 399
           AIRE++C+ V++A                 +   +S +  I + +     +  ++   E+
Sbjct: 74  AIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRGVES 133

Query: 398 AEAVFSELQRQFECCGNTGAINYGQFT-LPESCCVKKSILSTFAGNNCTVDAANPGCGPK 222
           A   + +  + FECCG T + ++  FT +P+SCC+++  +   A  N  +    PGC   
Sbjct: 134 A---WDKTHQLFECCGVTNSSDWLTFTTIPDSCCIEE--IEGCARENAPL--FEPGCIHS 186

Query: 221 IGELYQKWNKPIAGVALGVACVEVVGALFALCLANSI 111
           + +   K    + G+   +A +++VG  FA CL+ SI
Sbjct: 187 VEQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSI 223


>U53342-5|AAA96217.1|  178|Caenorhabditis elegans Hypothetical
           protein F01G12.1 protein.
          Length = 178

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +3

Query: 363 ELSLQFREDSLGGLVCVSVGSLFE*HADAIHNALLDALAVGEEEDADHHLHN-DDHQQED 539
           +L+L  +E+SL  ++  SV +  E H +      LD      +   DHH+HN ++H+  +
Sbjct: 53  DLTLNHKEESLYDMLVASVRAGRESHFELDQ---LDVHTETNQSGHDHHIHNNEEHKHHN 109

Query: 540 CVRDDH 557
               DH
Sbjct: 110 MRSHDH 115


>Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical
           protein T28F3.3 protein.
          Length = 393

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 489 EEDADHHLHNDDHQQEDCVRDDH 557
           EE  DHH H+ DH  E  +R +H
Sbjct: 45  EELHDHHEHDHDHHDEQLIRKNH 67


>Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical
           protein C54D10.4 protein.
          Length = 408

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 389 VFSELQRQFECCGNTGAINYGQF 321
           +   +QR++ CCG  GAI+YG F
Sbjct: 276 IADRVQRRYCCCGYNGAIDYGFF 298


>AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical
           protein Y39B6A.6 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -2

Query: 377 LQRQFECCGNTGAINYGQF--TLPESCCVK 294
           LQ  F CCGN G  ++  F   +P SC ++
Sbjct: 200 LQTAFRCCGNAGCSDFRVFRQDIPRSCDIR 229


>AC087079-1|AAK27872.1|  402|Caenorhabditis elegans Hypothetical
           protein Y37E3.1 protein.
          Length = 402

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +2

Query: 602 ITNITAPTTMKIHGPTARWVFXKSLTMVQFIRNAXPIPTNXRPRS 736
           I N+T P+  +IH  + +W+  +  T  Q  +N  P+P +   R+
Sbjct: 353 IKNLTIPSDPEIHVDSVKWI--RVATPTQMKKNGVPLPESVLARA 395


>U40061-3|AAO91697.1|  205|Caenorhabditis elegans Claudin-like in
           caenorhabditisprotein 3, isoform b protein.
          Length = 205

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 660 THLAVGPWIFIVVGAVMFVIAFLGMLWS 577
           T L V  WI ++VG  M VIA +   WS
Sbjct: 6   TGLQVVSWILLLVGTGMLVIALISDYWS 33


>U40061-2|AAA81150.1|  222|Caenorhabditis elegans Claudin-like in
           caenorhabditisprotein 3, isoform a protein.
          Length = 222

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 660 THLAVGPWIFIVVGAVMFVIAFLGMLWS 577
           T L V  WI ++VG  M VIA +   WS
Sbjct: 6   TGLQVVSWILLLVGTGMLVIALISDYWS 33


>U23523-8|AAC46563.1|   87|Caenorhabditis elegans Hypothetical
           protein F53A9.8 protein.
          Length = 87

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 495 DADHHLHNDDHQQED 539
           D DHH H+D+H  ED
Sbjct: 10  DGDHHDHHDEHHHED 24


>U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformd protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 112 MELARHSANRAPTTSTQATPR 174
           M ++RH + R+ TT+T ATPR
Sbjct: 1   MTVSRHYSRRSTTTTTTATPR 21


>U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine receptor
           protein 1, isoforma protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 112 MELARHSANRAPTTSTQATPR 174
           M ++RH + R+ TT+T ATPR
Sbjct: 249 MTVSRHYSRRSTTTTTTATPR 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,324,582
Number of Sequences: 27780
Number of extensions: 295784
Number of successful extensions: 1011
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)