Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_D21
(792 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.0
03_05_0576 + 25765137-25766420 31 1.0
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 30 1.8
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.2
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 29 3.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.6
07_01_0080 + 587674-588510 29 5.6
02_03_0120 + 15463163-15465250 29 5.6
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 7.4
07_03_0154 + 14509979-14512033 28 7.4
02_05_0686 - 30900748-30902167,30903442-30904742 28 7.4
01_01_0715 - 5542648-5543219,5543352-5543544 28 7.4
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 9.8
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 28 9.8
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 9.8
06_03_1310 + 29238644-29240260 28 9.8
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 9.8
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 634 PPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSPP 789
PP P P P P P PSP PPP PP
Sbjct: 304 PPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPP 355
>03_05_0576 + 25765137-25766420
Length = 427
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 730 PRPSPXXXSXSPXXPPPSPP 789
P PSP SP PPPSPP
Sbjct: 75 PSPSPPPQPSSPPPPPPSPP 94
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 730 PRPSPXXXSXSPXXPPPSPP 789
P PSP S SP P PSPP
Sbjct: 119 PHPSPRVSSSSPRSPTPSPP 138
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 731 PXPXPXGXPXRXXPPXPPPP 790
P P P P R PP PPPP
Sbjct: 605 PPPPPPILPNRSVPPPPPPP 624
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +1
Query: 634 PPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSPP 789
PP P P P P P P+P + P PPP PP
Sbjct: 620 PPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPP 671
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 730 PRPSPXXXSXSPXXPPPSPP 789
P PSP + P PPP PP
Sbjct: 535 PSPSPTAAAPPPPPPPPPPP 554
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 731 PXPXPXGXPXRXXPPXPPPP 790
P P P G PP PPPP
Sbjct: 550 PPPPPSGNKPAFSPPPPPPP 569
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 728 SPXPXPXGXPXRXXPPXPPPP 790
+P P P P + PP PPPP
Sbjct: 215 APAPEPEPEPPKKEPPPPPPP 235
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +1
Query: 634 PPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSPP 789
PP P + P P + P P P S P PPP PP
Sbjct: 76 PPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPP-PPPPPPSPPPSAPPPPPP 126
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 731 PXPXPXGXPXRXXPPXPPPP 790
P P P P PP PPPP
Sbjct: 109 PPPPPPSPPPSAPPPPPPPP 128
>07_01_0080 + 587674-588510
Length = 278
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 730 PRPSPXXXSXSPXXPPPSPP 789
P P P S SP PPP PP
Sbjct: 93 PPPPPPPSSGSPPPPPPPPP 112
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 731 PXPXPXGXPXRXXPPXPPPP 790
P P P P PP PPPP
Sbjct: 91 PPPPPPPPPSSGSPPPPPPP 110
>02_03_0120 + 15463163-15465250
Length = 695
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 733 RPSPXXXSXSPXXPPPSPP 789
+P P S SP PPPSPP
Sbjct: 298 QPLPPPPSPSPSPPPPSPP 316
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 731 PXPXPXGXPXRXXPPXPPPP 790
P P P P PP PPPP
Sbjct: 437 PPPPPPPLPPNMPPPLPPPP 456
>07_03_0154 + 14509979-14512033
Length = 684
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 731 PXPXPXGXPXRXXPPXPPPP 790
P P P P PP PPPP
Sbjct: 45 PLPLPAAAPPPPPPPPPPPP 64
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 728 SPXPXPXGXPXRXXPPXPPPP 790
+P P P P PP PPPP
Sbjct: 312 APPPPPPPKPAAAAPPPPPPP 332
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 634 PPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSP 786
PP P PA R P P P+P + SP PPP P
Sbjct: 146 PPPPTVPAAPTPRPSPPPPAAGTNGTARAPSPPVPAP-APAGSPPPPPPPP 195
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 731 PXPXPXGXPXRXXPPXPPP 787
P P P G P PP PPP
Sbjct: 930 PPPPPPGKPGGPPPPPPPP 948
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +1
Query: 631 TPPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSPP 789
TPP AG P A P P + +P PPP PP
Sbjct: 302 TPPRTRFSAGSGAEMNKQMASPPSNPPPAPPPPPPPPSRFNNTTPKPPPPPPP 354
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 634 PPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSPP 789
PP P P P P P P S P PPP PP
Sbjct: 1123 PPLPDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPP 1174
>06_03_1310 + 29238644-29240260
Length = 538
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 737 PXPXGXPXRXXPPXPPPP 790
P P P R PP PPPP
Sbjct: 384 PLPHHMPPRRTPPTPPPP 401
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 730 PRPSPXXXSXSPXXPPPSPP 789
P P P S +P PPP PP
Sbjct: 338 PSPRPVQPSNAPPPPPPPPP 357
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,247,293
Number of Sequences: 37544
Number of extensions: 219516
Number of successful extensions: 3687
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2754
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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