Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_D21
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.54
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.54
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.54
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 3.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 634 PPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSPP 789
PP P P G P P P P P P PPP PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 634 PPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSPP 789
PP P P G P P G P P P PPP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPP---PPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 634 PPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSPP 789
PP P P G P P P P P P PPP PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 634 PPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSPP 789
PP P P G P P G P P P PPP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPP---PPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 634 PPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSPP 789
PP P P G P P P P P P PPP PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 634 PPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPPSPP 789
PP P P G P P G P P P PPP PP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPP---PPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 730 PRPSPXXXSXSPXXPPPSPP 789
P P P S SP PPP PP
Sbjct: 478 PSPQPAEVSKSPPPPPPLPP 497
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 730 PRPSPXXXSXSPXXPPPSPP 789
P P P S SP PPP PP
Sbjct: 485 PSPQPAEVSKSPPPPPPLPP 504
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +1
Query: 631 TPPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPP--SPP 789
+PP P P G P AG P P P +P PP SPP
Sbjct: 296 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +1
Query: 631 TPPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPP--SPP 789
+PP P P G P AG P P P +P PP SPP
Sbjct: 317 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +1
Query: 631 TPPXPHXPAGXXXRXWXXXPXPXXXXXXAGXXXPRPSPXXXSXSPXXPPP--SPP 789
+PP P P G P AG P P P +P PP SPP
Sbjct: 302 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 728 SPXPXPXGXPXRXXPPXPPPP 790
+P P P P PP PPPP
Sbjct: 575 APPPPPPPPPMLGGPPPPPPP 595
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,119,993
Number of Sequences: 27780
Number of extensions: 135453
Number of successful extensions: 1343
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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