Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_D17
         (784 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016754-1|AAH16754.1|   76|Homo sapiens KPNA4 protein protein.        33   0.88 
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.     27   1.2  
U96136-1|AAC63103.1| 1225|Homo sapiens delta-catenin protein.          25   9.5  
AB013805-1|BAA36163.1| 1225|Homo sapiens neural plakophilin-rela...    25   9.5  
U81004-1|AAD00453.1| 1040|Homo sapiens GT24 protein.                   25   9.7  

>BC016754-1|AAH16754.1|   76|Homo sapiens KPNA4 protein protein.
          Length = 76

 Score = 33.5 bits (73), Expect = 0.88
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -1

Query: 622 PPPPPPPPXXXFFFFFFFFXF 560
           PP PPP P    FFFFF F F
Sbjct: 22  PPFPPPSPHPILFFFFFAFLF 42



 Score = 31.5 bits (68), Expect = 3.5
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -1

Query: 619 PPPPPPPXXXFFFFFFFFXF 560
           PPP P P   FFFF F F F
Sbjct: 25  PPPSPHPILFFFFFAFLFFF 44


>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
          Length = 1709

 Score = 26.6 bits (56), Expect(2) = 1.2
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 622 PPPPPPPP 599
           PPPPPPPP
Sbjct: 610 PPPPPPPP 617



 Score = 25.0 bits (52), Expect(2) = 1.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 619 PPPPPPPXXXFFF 581
           PPPPPPP   + F
Sbjct: 649 PPPPPPPPHIYDF 661


>U96136-1|AAC63103.1| 1225|Homo sapiens delta-catenin protein.
          Length = 1225

 Score = 25.0 bits (52), Expect(2) = 9.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 619 PPPPPPPXXXF 587
           PPPPPPP   F
Sbjct: 220 PPPPPPPREPF 230



 Score = 23.4 bits (48), Expect(2) = 9.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 622 PPPPPPPP 599
           P PPPPPP
Sbjct: 218 PAPPPPPP 225


>AB013805-1|BAA36163.1| 1225|Homo sapiens neural plakophilin-related
           arm-repeat protein (NPRAP) protein.
          Length = 1225

 Score = 25.0 bits (52), Expect(2) = 9.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 619 PPPPPPPXXXF 587
           PPPPPPP   F
Sbjct: 220 PPPPPPPREPF 230



 Score = 23.4 bits (48), Expect(2) = 9.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 622 PPPPPPPP 599
           P PPPPPP
Sbjct: 218 PAPPPPPP 225


>U81004-1|AAD00453.1| 1040|Homo sapiens GT24 protein.
          Length = 1040

 Score = 25.0 bits (52), Expect(2) = 9.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 619 PPPPPPPXXXF 587
           PPPPPPP   F
Sbjct: 35  PPPPPPPREPF 45



 Score = 23.4 bits (48), Expect(2) = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 622 PPPPPPPP 599
           P PPPPPP
Sbjct: 33  PAPPPPPP 40


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,423,170
Number of Sequences: 237096
Number of extensions: 1260720
Number of successful extensions: 32991
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20050
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)