Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_D14
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82064-2|CAI79180.1| 167|Caenorhabditis elegans Hypothetical pr... 31 0.70
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.1
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 3.7
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 6.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 6.5
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 6.5
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 8.6
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 8.6
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 8.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.6
>Z82064-2|CAI79180.1| 167|Caenorhabditis elegans Hypothetical
protein W02B9.2 protein.
Length = 167
Score = 31.5 bits (68), Expect = 0.70
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = -2
Query: 517 NXXRVGGVXXXXXGERAGXRPXXRGGXRXXGVGXAXGGAGXPXGGXXXGGAR 362
N R GG G+R G R RGG R G GG G GG R
Sbjct: 83 NGGRGGGRGGDRGGDRGGDRGGDRGGDRGGDRGGDRGGRRGRGGYRDGGGGR 134
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Frame = +3
Query: 369 PPXXIPPXGXPAPPXAXPTPXXR---XPPRXXGLXPALSPXXXXXTPPTR 509
PP PP G P PP P + PP G+ ++P PP +
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Frame = +3
Query: 369 PPXXIPPXGXPAPPXAXPTPXXR---XPPRXXGLXPALSPXXXXXTPPTR 509
PP PP G P PP P + PP G+ ++P PP +
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Frame = +3
Query: 369 PPXXIPPXGXPAPPXAXPTPXXR---XPPRXXGLXPALSPXXXXXTPPTR 509
PP PP G P PP P + PP G+ ++P PP +
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 391
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = +3
Query: 369 PPXXIPPXGXPAPPXAXPTPXXRXPPRXXGLXPALSPXXXXXTPPTRXXLGXXWPXRP 542
PP + P P PP TP PP G+ P P TP G P P
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRP-PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Frame = +3
Query: 363 RAPPXXIPPXGXPAP----PXAXPTPXXRXPPR 449
R+PP PP P+P P P+P R PPR
Sbjct: 153 RSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPR 185
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = +3
Query: 369 PPXXIPPXGXPAPPXAXPTPXXRXPPRXXGLXPALSPXXXXXTPPTRXXLGXXWPXRP 542
PP + P P PP TP PP G+ P P TP G P P
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRP-PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/61 (34%), Positives = 21/61 (34%)
Frame = -2
Query: 544 PGRXGXXXPNXXRVGGVXXXXXGERAGXRPXXRGGXRXXGVGXAXGGAGXPXGGXXXGGA 365
PG G P R GG G R G GG G G G G GG GG
Sbjct: 46 PG-WGGGGPGWGRGGG-GSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGG 103
Query: 364 R 362
R
Sbjct: 104 R 104
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -2
Query: 475 ERAGXRPXXRGGXRXXGVGXAXGGAGXPXGGXXXGGAR 362
+ AG P RGG G G GG G G GG R
Sbjct: 203 DAAGHYPSQRGGSGGGGGGGGGGGYGSGGGWGGGGGGR 240
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -2
Query: 478 GERAGXRPXXRGGXRXXGVGXAXGGAGXPXGGXXXGGA 365
G AG RGG R G GG+G GG GA
Sbjct: 46 GASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGA 83
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 6/63 (9%)
Frame = +3
Query: 372 PXXIPPXGXPAP------PXAXPTPXXRXPPRXXGLXPALSPXXXXXTPPTRXXLGXXWP 533
P PP G AP P A P P R PP G + P PT P
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAPEIP 828
Query: 534 XRP 542
RP
Sbjct: 829 ARP 831
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 369 PPXXIPPXGXPAPPXAXPTPXXRXPP 446
PP PP P PP P P PP
Sbjct: 47 PPPICPPQFCPPPPMCPPPPPPPPPP 72
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 6/63 (9%)
Frame = +3
Query: 372 PXXIPPXGXPAP------PXAXPTPXXRXPPRXXGLXPALSPXXXXXTPPTRXXLGXXWP 533
P PP G AP P A P P R PP G + P PT P
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAPEIP 828
Query: 534 XRP 542
RP
Sbjct: 829 ARP 831
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 369 PPXXIPPXGXPAPPXAXPTPXXRXPPRXXGLXPALS 476
PP PP G P PP P P + P +S
Sbjct: 90 PPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMS 125
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 369 PPXXIPPXGXPAPPXAXPTPXXRXPPRXXGLXPALS 476
PP PP G P PP P P + P +S
Sbjct: 113 PPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMS 148
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 369 PPXXIPPXGXPAPPXAXPTPXXRXPPRXXGLXPALS 476
PP PP G P PP P P + P +S
Sbjct: 363 PPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMS 398
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +3
Query: 366 APPXXIPPXGXPAPPXAXPTPXXRXPPRXXGLXPALSPXXXXXTPP 503
+PP PP G PP +P PPR +L P +PP
Sbjct: 279 SPPP--PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +3
Query: 366 APPXXIPPXGXPAPPXAXPTPXXRXPPRXXGLXPALSPXXXXXTPP 503
+PP PP G PP +P PPR +L P +PP
Sbjct: 300 SPPP--PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +3
Query: 366 APPXXIPPXGXPAPPXAXPTPXXRXPPRXXGLXPALSPXXXXXTPP 503
+PP PP G PP +P PPR +L P +PP
Sbjct: 285 SPPP--PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,419,878
Number of Sequences: 27780
Number of extensions: 109129
Number of successful extensions: 911
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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