Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_D13
         (701 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939...    31   0.67 
02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217...    31   0.89 
03_06_0189 + 32214702-32215154                                         29   2.7  
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765...    29   4.7  
07_01_0130 - 963856-965454                                             28   6.2  
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116...    28   8.3  

>11_04_0364 - 16791774-16792490,16792545-16793561,16793856-16793920,
            16794787-16796964,16797065-16797322,16799815-16800172
          Length = 1530

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = -1

Query: 365  SMVAKLKLKGIDGRAPPGVEPAA*FDATREISPGPDTGR--IDRLTALS*FGGWWCMAVL 192
            S++ +L+L+ +D R  PG+E AA       I  GP   +  I  ++++   G + C    
Sbjct: 915  SLIPQLQLQTLDVRCSPGIEWAANGPVQPFIQAGPSKPKPLIHGISSMEAMGKYRCGVPC 974

Query: 191  SWWSDL 174
            SW  DL
Sbjct: 975  SWSLDL 980


>02_04_0451 +
           23021139-23021269,23021366-23021498,23021594-23021789,
           23023376-23023737,23024049-23024363
          Length = 378

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +1

Query: 181 LHQLRTAMHHHP--PNQERAVNLSILPVSGPGEISRVASN*AAGSTPGGALPSIPLSFSF 354
           LH L T     P  P +  +   +ILP   PG  S +AS    G TP G +   P  F F
Sbjct: 313 LHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFF 372


>03_06_0189 + 32214702-32215154
          Length = 150

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 298 AAGSTPGGALPSIPLSFSFATILPPESKIFGFPEAA 405
           AA + P  ALP +P   +  T LPP   I   P+AA
Sbjct: 30  AAAAAPPAALPVLPAVPALPTTLPPMPAIPAVPQAA 65


>03_02_0774 +
           11074508-11074880,11076270-11076370,11076453-11076509,
           11076596-11076690,11077480-11077579,11078272-11078330,
           11078874-11079001,11079362-11079440,11079708-11079795,
           11080490-11080590,11080822-11080900,11081740-11081850,
           11082655-11082750,11082885-11083007,11085750-11085947,
           11086071-11086172,11086570-11086634,11086888-11087008,
           11088540-11088697,11088823-11088973,11089414-11089521,
           11089939-11090031,11090285-11090321,11090659-11090906,
           11091396-11091542,11091929-11092099,11092166-11092175,
           11093360-11093505
          Length = 1114

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +1

Query: 265 PGEISRV-ASN*AAGSTPGGALPSIPLSFSFATILPPESKIFGFPEAARRAIVVTSA 432
           PG   R+ AS     S+P  A P  PL     T++PP +    FP   RR +   SA
Sbjct: 8   PGSFHRLLASRHYPPSSP--APPPRPLLLLPKTLIPPAAAAMEFPRRGRRDVAAASA 62


>07_01_0130 - 963856-965454
          Length = 532

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 184 HQLRTAMHHHPPNQERAVNLSILPVSGPGEISR 282
           H +   +   PPN     NL +LP+ GP ++ +
Sbjct: 195 HIINFLLRPEPPNTLSVDNLGVLPIIGPAKVGK 227


>09_06_0076 + 20710482-20710670,20711313-20711547,20711664-20711689,
            20712000-20712293,20712603-20712728,20712827-20712896,
            20712992-20713182,20713394-20713519,20713878-20714279,
            20714364-20714758,20714861-20715315,20715403-20715524,
            20715653-20715693,20716026-20716129,20716363-20716576,
            20717667-20717780,20718576-20718612
          Length = 1046

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +3

Query: 279  PCCVKLSRRLHSWWCPSVNSFKFQLCNHTPPGVQNLWFPGSCPPSHCSNVGGSL 440
            PC   L R   S W   V++   Q C  + P  +   +P   PP   S VGG L
Sbjct: 936  PCKTSLPRESASAWWTQVDTVSGQGCGESSPLCRPPAYPPE-PPVVLSLVGGQL 988


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,595,554
Number of Sequences: 37544
Number of extensions: 434193
Number of successful extensions: 1216
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)