Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_D13
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68117-2|CAA92178.1|  333|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AL021474-2|CAA16309.3|  655|Caenorhabditis elegans Hypothetical ...    31   1.1  
U23517-11|AAY44017.1|  288|Caenorhabditis elegans Hypothetical p...    29   4.3  
Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical p...    27   9.8  

>Z68117-2|CAA92178.1|  333|Caenorhabditis elegans Hypothetical
           protein F45E6.4 protein.
          Length = 333

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 321 CPSVNSFKFQLCNHTPPGVQNLWFPGSCPPSHCSN 425
           CP  ++F F  C     G++  +FPG+CP   CS+
Sbjct: 203 CPCQHAFAFPAC-----GMETGFFPGTCPEMTCSS 232


>AL021474-2|CAA16309.3|  655|Caenorhabditis elegans Hypothetical
           protein Y32F6A.3 protein.
          Length = 655

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +1

Query: 232 AVNLSILPVSGPGEISRVASN*AAGSTPGG-ALPSIPLSFSFATILPPESKIFGFPEAAR 408
           A N S+   S P  + R  S  +  +TP G A P  PLS S +    P+S   G P + +
Sbjct: 513 ATNTSVSS-STPRSVVRTTSTSSVPTTPTGLAAPKTPLSASVSATNEPDSTTNGTPLSRK 571

Query: 409 RAI 417
           R++
Sbjct: 572 RSM 574


>U23517-11|AAY44017.1|  288|Caenorhabditis elegans Hypothetical
           protein D1022.9 protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 316 QEWSLRLNLTQHGKSHQARTPEGLTD*QLFLD 221
           Q W L L    H K + ARTP  + D ++F++
Sbjct: 59  QYWPLMLARFSHEKPYVARTPAAIADAEMFIN 90


>Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical
           protein F32A7.5c protein.
          Length = 877

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = -1

Query: 407 RAASGKPKILDSGGSMVAKLKLKG-IDGRAPPGVEPAA*FDATREISPGPDTGRID 243
           R A  KP    +    +A+ K  G + G AP    PAA   A    +P P+  R D
Sbjct: 326 RGAPAKPAANTAKAEPIAQKKTVGKVQGTAPSKPAPAAPASAATSPAPAPEAPRRD 381


>Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical
           protein F32A7.5b protein.
          Length = 764

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = -1

Query: 407 RAASGKPKILDSGGSMVAKLKLKG-IDGRAPPGVEPAA*FDATREISPGPDTGRID 243
           R A  KP    +    +A+ K  G + G AP    PAA   A    +P P+  R D
Sbjct: 326 RGAPAKPAANTAKAEPIAQKKTVGKVQGTAPSKPAPAAPASAATSPAPAPEAPRRD 381


>Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical
           protein F32A7.5a protein.
          Length = 878

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = -1

Query: 407 RAASGKPKILDSGGSMVAKLKLKG-IDGRAPPGVEPAA*FDATREISPGPDTGRID 243
           R A  KP    +    +A+ K  G + G AP    PAA   A    +P P+  R D
Sbjct: 326 RGAPAKPAANTAKAEPIAQKKTVGKVQGTAPSKPAPAAPASAATSPAPAPEAPRRD 381


>U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical
           protein R144.2a protein.
          Length = 823

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 319 HQEWSLRLNLTQHGKSHQARTP 254
           H +W ++ NL +HG ++ A  P
Sbjct: 696 HMDWHVKQNLARHGSNNSAAVP 717


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,786,937
Number of Sequences: 27780
Number of extensions: 324819
Number of successful extensions: 934
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)