Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_D06
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   113   2e-25
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   113   2e-25
X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   113   3e-25
AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p pro...    34   0.24 
AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A ...    34   0.24 
AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA ...    34   0.24 
AY089218-1|AAL89956.1|  305|Drosophila melanogaster AT01821p pro...    31   2.2  
AF045470-1|AAF18568.1|  305|Drosophila melanogaster Gom protein.       31   2.2  
AE013599-3345|AAF46808.2|  305|Drosophila melanogaster CG6727-PA...    31   2.2  

>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =  113 bits (273), Expect = 2e-25
 Identities = 58/100 (58%), Positives = 72/100 (72%)
 Frame = -1

Query: 507 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 328
           QPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A 
Sbjct: 284 QPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAA 343

Query: 327 LELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRK 208
           L   +R   K LA A+K  ++L+K + A  A K    R K
Sbjct: 344 LAAEKRTVAKVLAKAKKQNVELAKSHFANVATKAAANRAK 383



 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 22/46 (47%), Positives = 30/46 (65%)
 Frame = -2

Query: 590 TQSAFXRLDPLFGSWKTPSKQKKNFNLPSQRWPTLTSHVFSSLMRS 453
           T+SAF RL+ LFG+WK PS  KK +NLP    P + +   S L++S
Sbjct: 256 TESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKS 298


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =  113 bits (273), Expect = 2e-25
 Identities = 58/100 (58%), Positives = 72/100 (72%)
 Frame = -1

Query: 507 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 328
           QPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A 
Sbjct: 284 QPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAA 343

Query: 327 LELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRK 208
           L   +R   K LA A+K  ++L+K + A  A K    R K
Sbjct: 344 LAAEKRTVAKVLAKAKKQNVELAKSHFANVATKAAANRAK 383



 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 22/46 (47%), Positives = 30/46 (65%)
 Frame = -2

Query: 590 TQSAFXRLDPLFGSWKTPSKQKKNFNLPSQRWPTLTSHVFSSLMRS 453
           T+SAF RL+ LFG+WK PS  KK +NLP    P + +   S L++S
Sbjct: 256 TESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKS 298


>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =  113 bits (271), Expect = 3e-25
 Identities = 57/95 (60%), Positives = 71/95 (74%)
 Frame = -1

Query: 507 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 328
           QPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A 
Sbjct: 284 QPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAA 343

Query: 327 LELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLR 223
           L   +R   K LA A+K  ++L+K + A  A K R
Sbjct: 344 LAAEKRTVAKVLAKAKKQNVELAKSHFANVATKAR 378



 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 22/46 (47%), Positives = 30/46 (65%)
 Frame = -2

Query: 590 TQSAFXRLDPLFGSWKTPSKQKKNFNLPSQRWPTLTSHVFSSLMRS 453
           T+SAF RL+ LFG+WK PS  KK +NLP    P + +   S L++S
Sbjct: 256 TESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKS 298


>AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p
           protein.
          Length = 712

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
 Frame = -1

Query: 483 LTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKLNPYAAVLKRKAILELRRRK 307
           LTR+   ++ +++  A  K+ + + RK  PL  ++A  +KLN    + K++   +  R +
Sbjct: 585 LTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKLNSIEMIYKKRKHDKESRLE 643

Query: 306 NLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRKN 205
            ++A   D E+ G K  + N         +R+ KN
Sbjct: 644 TVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678


>AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A
           protein.
          Length = 712

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
 Frame = -1

Query: 483 LTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKLNPYAAVLKRKAILELRRRK 307
           LTR+   ++ +++  A  K+ + + RK  PL  ++A  +KLN    + K++   +  R +
Sbjct: 585 LTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKLNSIEMIYKKRKHDKESRLE 643

Query: 306 NLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRKN 205
            ++A   D E+ G K  + N         +R+ KN
Sbjct: 644 TVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678


>AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA
           protein.
          Length = 712

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
 Frame = -1

Query: 483 LTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKLNPYAAVLKRKAILELRRRK 307
           LTR+   ++ +++  A  K+ + + RK  PL  ++A  +KLN    + K++   +  R +
Sbjct: 585 LTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKLNSIEMIYKKRKHDKESRLE 643

Query: 306 NLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRKN 205
            ++A   D E+ G K  + N         +R+ KN
Sbjct: 644 TVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678


>AY089218-1|AAL89956.1|  305|Drosophila melanogaster AT01821p
           protein.
          Length = 305

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 369 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRK 208
           +L+    +   +   EL  +  LK L + EK   K+ K    +KAE+ +ER +K
Sbjct: 204 ELDELQRLAAEREAFELWEKDELKRLEEQEKEREKIRKEKAKVKAERDKEREKK 257


>AF045470-1|AAF18568.1|  305|Drosophila melanogaster Gom protein.
          Length = 305

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 369 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRK 208
           +L+    +   +   EL  +  LK L + EK   K+ K    +KAE+ +ER +K
Sbjct: 204 ELDELQRLAAEREAFELWEKDELKRLEEQEKEREKIRKEKAKVKAERDKEREKK 257


>AE013599-3345|AAF46808.2|  305|Drosophila melanogaster CG6727-PA
           protein.
          Length = 305

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 369 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRK 208
           +L+    +   +   EL  +  LK L + EK   K+ K    +KAE+ +ER +K
Sbjct: 204 ELDELQRLAAEREAFELWEKDELKRLEEQEKEREKIRKEKAKVKAERDKEREKK 257


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,247,831
Number of Sequences: 53049
Number of extensions: 416245
Number of successful extensions: 1403
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)