Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_D02
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.8
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 29 4.8
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 6.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.3
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 8.3
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 8.3
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/91 (27%), Positives = 27/91 (29%)
Frame = +3
Query: 657 PXPXXAPPXXNXXPXXXXPXPXXXSPPXPXVRXXDGXAECXPG*YXXPGLPXPXXXLHXX 836
P P PP P P PP P G PG PG+P P
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPP--PPPGRTPGPPG---MPGMPPP-----PP 321
Query: 837 XSQKXPPRRXAXXPLPASXXXXXXSQPXPPP 929
S+ PP P P P PPP
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/91 (27%), Positives = 27/91 (29%)
Frame = +3
Query: 657 PXPXXAPPXXNXXPXXXXPXPXXXSPPXPXVRXXDGXAECXPG*YXXPGLPXPXXXLHXX 836
P P PP P P PP P G PG PG+P P
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPP--PPPGRTPGPPG---MPGMPPP-----PP 331
Query: 837 XSQKXPPRRXAXXPLPASXXXXXXSQPXPPP 929
S+ PP P P P PPP
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/76 (27%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +2
Query: 647 GXSPXXXAXAPRPKPXPXEXLXX-TXXXKPPPXXCPPXXWRGXVXXRVIPXPXVAXPXRP 823
G P + +P P P T PPP PP G P P P P
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP----PPPRAGSPPPP 300
Query: 824 SPPXXLPEXSTXPXCQ 871
PP P + P Q
Sbjct: 301 PPPRGSPPTGSLPPPQ 316
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/76 (27%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +2
Query: 647 GXSPXXXAXAPRPKPXPXEXLXX-TXXXKPPPXXCPPXXWRGXVXXRVIPXPXVAXPXRP 823
G P + +P P P T PPP PP G P P P P
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP----PPPRAGSPPPP 321
Query: 824 SPPXXLPEXSTXPXCQ 871
PP P + P Q
Sbjct: 322 PPPRGSPPTGSLPPPQ 337
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/76 (27%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +2
Query: 647 GXSPXXXAXAPRPKPXPXEXLXX-TXXXKPPPXXCPPXXWRGXVXXRVIPXPXVAXPXRP 823
G P + +P P P T PPP PP G P P P P
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP----PPPRAGSPPPP 306
Query: 824 SPPXXLPEXSTXPXCQ 871
PP P + P Q
Sbjct: 307 PPPRGSPPTGSLPPPQ 322
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +2
Query: 677 PRPKPXPXEXLXXTXXXKPPPXXCPPXXWRGXVXXRVIPXPXVAXPXRPSP---PXXLPE 847
P+PKP P KP P P + + P P + +P+P P +PE
Sbjct: 227 PKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPE 286
Query: 848 XSTXP 862
P
Sbjct: 287 LKPKP 291
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/67 (26%), Positives = 20/67 (29%)
Frame = +2
Query: 656 PXXXAXAPRPKPXPXEXLXXTXXXKPPPXXCPPXXWRGXVXXRVIPXPXVAXPXRPSPPX 835
P AP P T PP PP V P P A P+P
Sbjct: 176 PPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNP 235
Query: 836 XLPEXST 856
PE +T
Sbjct: 236 PAPENTT 242
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 647 GXSPXXXAXAPRPKPXPXEXLXXTXXXKPPPXXCPPXXWRG 769
G +P A P P P P L PPP PP G
Sbjct: 621 GMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 647 GXSPXXXAXAPRPKPXPXEXLXXTXXXKPPPXXCPPXXWRG 769
G +P A P P P P L PPP PP G
Sbjct: 447 GMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 487
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/66 (30%), Positives = 22/66 (33%)
Frame = +2
Query: 656 PXXXAXAPRPKPXPXEXLXXTXXXKPPPXXCPPXXWRGXVXXRVIPXPXVAXPXRPSPPX 835
P AP P P P + PPP CPP P P P P PP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPP-MCPP------------PPPPPPPPMCPPPPP 79
Query: 836 XLPEXS 853
+P S
Sbjct: 80 PMPSYS 85
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = +2
Query: 674 APRPKPXPXEXLXXTXXXKPPPXXCPPXXWRGXVXXRVIPXPXVAXPXRPSPPXXLPEXS 853
APRP P + PPP P P P A P P PP P S
Sbjct: 73 APRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPP--PTPS 130
Query: 854 TXPXC-QXPXP 883
C Q P P
Sbjct: 131 PLVCCKQAPVP 141
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +3
Query: 636 PGXWGXPPXPXXAPPXXNXXPXXXXPXPXXXSP 734
P W PP P PP P P P P
Sbjct: 56 PPPWDRPPPPWRRPPWHRRPPWGLPPPPPPPEP 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,477,161
Number of Sequences: 27780
Number of extensions: 170768
Number of successful extensions: 551
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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