Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_C23
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 230 7e-61
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 230 7e-61
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 230 7e-61
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 230 7e-61
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 230 7e-61
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 230 7e-61
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 230 7e-61
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 230 7e-61
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 230 bits (563), Expect = 7e-61
Identities = 108/162 (66%), Positives = 130/162 (80%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -1
Query: 774 RQRGSHM-ESNLTVVPXRTK*NGPREHLEKPIPVDSVFAQDEMIDCIGVTKXKGYKGVTX 598
RQ+ +H+ E + K + REHLEK + VD+VFAQDEMID IGVT+ G+KGVT
Sbjct: 174 RQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTS 233
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 234 RWHTKKLPRKTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 230 bits (563), Expect = 7e-61
Identities = 108/162 (66%), Positives = 130/162 (80%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -1
Query: 774 RQRGSHM-ESNLTVVPXRTK*NGPREHLEKPIPVDSVFAQDEMIDCIGVTKXKGYKGVTX 598
RQ+ +H+ E + K + REHLEK + VD+VFAQDEMID IGVT+ G+KGVT
Sbjct: 174 RQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTS 233
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 234 RWHTKKLPRKTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 230 bits (563), Expect = 7e-61
Identities = 108/162 (66%), Positives = 130/162 (80%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -1
Query: 774 RQRGSHM-ESNLTVVPXRTK*NGPREHLEKPIPVDSVFAQDEMIDCIGVTKXKGYKGVTX 598
RQ+ +H+ E + K + REHLEK + VD+VFAQDEMID IGVT+ G+KGVT
Sbjct: 76 RQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTS 135
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 136 RWHTKKLPRKTHKG 149
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 230 bits (563), Expect = 7e-61
Identities = 108/162 (66%), Positives = 130/162 (80%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 64.5 bits (150), Expect = 8e-11
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -1
Query: 669 VFAQDEMIDCIGVTKXKGYKGVTXRWHTKKLPRKTHQG 556
V A +MID IGVT+ G+KGVT RWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 230 bits (563), Expect = 7e-61
Identities = 108/162 (66%), Positives = 130/162 (80%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -1
Query: 774 RQRGSHM-ESNLTVVPXRTK*NGPREHLEKPIPVDSVFAQDEMIDCIGVTKXKGYKGVTX 598
RQ+ +H+ E + K + REHLEK + VD+VFAQDEMID IGVT+ G+KGVT
Sbjct: 174 RQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTS 233
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 234 RWHTKKLPRKTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 230 bits (563), Expect = 7e-61
Identities = 108/162 (66%), Positives = 130/162 (80%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -1
Query: 774 RQRGSHM-ESNLTVVPXRTK*NGPREHLEKPIPVDSVFAQDEMIDCIGVTKXKGYKGVTX 598
RQ+ +H+ E + K + REHLEK + VD+VFAQDEMID IGVT+ G+KGVT
Sbjct: 76 RQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTS 135
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 136 RWHTKKLPRKTHKG 149
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 230 bits (563), Expect = 7e-61
Identities = 108/162 (66%), Positives = 130/162 (80%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 64.5 bits (150), Expect = 8e-11
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -1
Query: 669 VFAQDEMIDCIGVTKXKGYKGVTXRWHTKKLPRKTHQG 556
V A +MID IGVT+ G+KGVT RWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 230 bits (563), Expect = 7e-61
Identities = 108/162 (66%), Positives = 130/162 (80%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -1
Query: 774 RQRGSHM-ESNLTVVPXRTK*NGPREHLEKPIPVDSVFAQDEMIDCIGVTKXKGYKGVTX 598
RQ+ +H+ E + K + REHLEK + VD+VFAQDEMID IGVT+ G+KGVT
Sbjct: 174 RQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTS 233
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 234 RWHTKKLPRKTHKG 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,237,233
Number of Sequences: 27780
Number of extensions: 395549
Number of successful extensions: 1084
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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