Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_C22
(693 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 1.5
03_02_0734 - 10809724-10809796,10809907-10810094,10810183-108102... 30 2.0
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 2.0
07_03_1267 + 25318220-25318407,25318674-25318844,25319086-253191... 29 2.6
02_05_0002 - 24849189-24849825,24850267-24850328 29 2.6
06_03_1310 + 29238644-29240260 29 3.5
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.5
06_01_1013 - 7931756-7935109 29 4.6
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 4.6
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 6.1
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 28 6.1
07_03_0890 - 22332768-22333382 28 6.1
07_01_0080 + 587674-588510 28 6.1
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 28 6.1
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 28 6.1
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 8.1
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 8.1
02_02_0286 - 8589736-8590857 28 8.1
01_03_0005 + 11568545-11569119,11569179-11569191 28 8.1
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
G G P PPP PPPPP
Sbjct: 1105 GAGAPPPPPPPGGITGVPPPPP 1126
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
G GG P PPP P PPP
Sbjct: 1144 GIGGVPPPPPVGGLGGPPAPPP 1165
>03_02_0734 -
10809724-10809796,10809907-10810094,10810183-10810289,
10810383-10810593
Length = 192
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 584 GGGGGAXPPXXXXXXKKXPPPP 519
GGGGGA PP PPPP
Sbjct: 41 GGGGGAAPPDTIILLYVRPPPP 62
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 567 PXPPPXXXXXKXPPPPPXKK 508
P PPP PPPPP KK
Sbjct: 363 PPPPPPPPPRPPPPPPPIKK 382
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 567 PXPPPXXXXXKXPPPPPXKK 508
P PPP + PPPPP K
Sbjct: 362 PPPPPPPPPPRPPPPPPPIK 381
>07_03_1267 +
25318220-25318407,25318674-25318844,25319086-25319188,
25319394-25319885,25320723-25321156,25321333-25321388,
25321711-25321775,25322139-25322147
Length = 505
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPP 520
GGGG PPP PPPP
Sbjct: 79 GGGGGEMPPPYGGAAAAPPPP 99
>02_05_0002 - 24849189-24849825,24850267-24850328
Length = 232
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
GGGG P PPP PPPPP
Sbjct: 211 GGGGHPHPPP------PPPPPP 226
>06_03_1310 + 29238644-29240260
Length = 538
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
GGG P PP PPPPP
Sbjct: 491 GGGKLPFPPVHGVAYSSPPPPP 512
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 573 GXPXPPPXXXXXKXPPPPPXKK 508
G P PPP PPPPP K
Sbjct: 352 GPPPPPPPKGPSPPPPPPPGGK 373
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 579 GGGXPXPPPXXXXXKXPPPPPXK 511
G P PPP PPPPP K
Sbjct: 361 GPSPPPPPPPGGKKGGPPPPPPK 383
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 567 PXPPPXXXXXKXPPPPPXK 511
P PPP PPPPP K
Sbjct: 315 PPPPPKPAAAAPPPPPPPK 333
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPPXKK 508
GGGG PP PPPPP ++
Sbjct: 79 GGGGQRRGPPQERPSAAPPPPPPQQ 103
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
G GG P PPP + PPPPP
Sbjct: 260 GSGGPPRPPP----PQVPPPPP 277
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 573 GXPXPPPXXXXXKXPPPPPXK 511
G P PPP PPPPP +
Sbjct: 622 GAPPPPPPPGKPGGPPPPPPR 642
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 567 PXPPPXXXXXKXPPPPPXK 511
P PPP PPPPP K
Sbjct: 614 PPPPPRPPGAPPPPPPPGK 632
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 576 GGXPXPPPXXXXXKXPPPPP 517
G P PPP PPPPP
Sbjct: 622 GAPPPPPPPGKPGGPPPPPP 641
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPPXKKXXXXXXXFXF 478
GGG P PPP PPPPP + F F
Sbjct: 37 GGGAGPTPPP-------PPPPPHHRRARSEVAFRF 64
>07_03_0890 - 22332768-22333382
Length = 204
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 573 GXPXPPPXXXXXKXPPPPP 517
G P PPP PPPPP
Sbjct: 73 GSPPPPPAEATPPPPPPPP 91
>07_01_0080 + 587674-588510
Length = 278
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 576 GGXPXPPPXXXXXKXPPPPP 517
G P PPP PPPPP
Sbjct: 102 GSPPPPPPPPPPPPPPPPPP 121
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 579 GGGXPXPPPXXXXXKXPPPPPXKK 508
G G P PPP PP PP K
Sbjct: 117 GHGQPLPPPTSTPASEPPAPPEPK 140
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 567 PXPPPXXXXXKXPPPPPXKK 508
P PPP PPPPP +K
Sbjct: 357 PPPPPPFAPTLPPPPPPRRK 376
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 576 GGXPXPPPXXXXXKXPPPPP 517
G P PPP PPPPP
Sbjct: 927 GAPPPPPPPGKPGGPPPPPP 946
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 580 GGGXPXPPXXXXXXKKXPPPPXKK 509
GGG P PP + PPP KK
Sbjct: 380 GGGGPPPPALPGGPRARGPPPFKK 403
>02_02_0286 - 8589736-8590857
Length = 373
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +2
Query: 518 GGGGGFFXXXXXGGGXG--XPPPPXXXF 595
GGGG ++ G G G PPPP F
Sbjct: 224 GGGGSYYAPLITGAGNGMLMPPPPLPPF 251
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 518 GGGGGFFXXXXXGGGXGXPPPPXXXF 595
GGGGG + GGG PPP F
Sbjct: 121 GGGGGGWQQGGGGGGAYPTPPPPNPF 146
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,706,509
Number of Sequences: 37544
Number of extensions: 299661
Number of successful extensions: 2574
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2194
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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