Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_T7_C22
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 32 0.45
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.2
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 4.2
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 5.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 5.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 7.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 7.3
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 27 9.6
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 27 9.6
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 518 GGGGGFFXXXXXGGGXGXPPPP 583
GGGGG + GGG PPPP
Sbjct: 23 GGGGGGYSGGGGGGGDAAPPPP 44
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 518 GGGGGFFXXXXXGGGXGXPPPP 583
GGGGG+ GG PPPP
Sbjct: 24 GGGGGYSGGGGGGGDAAPPPPP 45
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 520 GGGGXFXXXXXXXGGXAPPPPP 585
GGGG + G APPPPP
Sbjct: 24 GGGGGYSGGGGGGGDAAPPPPP 45
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 576 GGXPXPPPXXXXXKXPPPPP 517
GG P PPP PPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPP 775
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 579 GGGXPXPPPXXXXXKXPPPPP 517
GG P PPP PPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPP 776
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
GG P PPP PPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPP 777
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
GG P PPP K PPPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 576 GGXPXPPPXXXXXKXPPPPP 517
GG P PPP PPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPP 775
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 579 GGGXPXPPPXXXXXKXPPPPP 517
GG P PPP PPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPP 776
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
GG P PPP PPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPP 777
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
GG P PPP K PPPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 576 GGXPXPPPXXXXXKXPPPPP 517
GG P PPP PPPPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPP 358
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 579 GGGXPXPPPXXXXXKXPPPPP 517
GG P PPP PPPPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPP 359
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
GG P PPP PPPPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPP 360
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
GG P PPP K PPPP
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPP 370
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 518 GGGGGFFXXXXXGGGXGXPPPP 583
GGGGG GGG PPPP
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPP 58
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 520 GGGGXFXXXXXXXGGXAPPPPP 585
GGGG GG APPPPP
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPP 58
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 518 GGGGGFFXXXXXGGGXGXPPPP 583
GGGGG GGG PPPP
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPP 115
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 520 GGGGXFXXXXXXXGGXAPPPPP 585
GGGG GG APPPPP
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPP 115
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPP 520
G GG P PPP PPPP
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPP 99
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 576 GGXPXPPPXXXXXKXPPPP 520
GG P PPP PPPP
Sbjct: 102 GGIPPPPPMFGAPPPPPPP 120
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 567 PXPPPXXXXXKXPPPPP 517
P PPP K PPPPP
Sbjct: 86 PPPPPPPPTLKAPPPPP 102
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 594 NXXXGGGGXPXPPPXXXXXKXPPPPP 517
N GG G P PP PPPPP
Sbjct: 41 NPCGGGFGPPPPPFGPVGYALPPPPP 66
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
GGG P PPP PPPP
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPP 696
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
GGG P PPP PPPP
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPP 696
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -1
Query: 579 GGGXPXPPPXXXXXKXPPP--PPXKK 508
GG P PPP + PPP PP ++
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSPPPRR 159
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 576 GGXPXPPPXXXXXKXPPPPP 517
G P PPP PPPPP
Sbjct: 574 GAPPPPPPPPPMLGGPPPPP 593
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
G GG PPP K PPPP
Sbjct: 22 GCGGKKKPPPPKSASKMGPPPP 43
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 561 PPPXXXXXKXPPPPPXKK 508
PPP + PPPPP +K
Sbjct: 20 PPPPPSPRRAPPPPPHRK 37
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 582 GGGGXPXPPPXXXXXKXPPPPP 517
G GG PPP K PPPP
Sbjct: 22 GCGGKKKPPPPKSASKMGPPPP 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,179,828
Number of Sequences: 27780
Number of extensions: 162686
Number of successful extensions: 1177
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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