Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_C21
         (786 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855    137   1e-32
04_04_0407 - 24983491-24983575,24983655-24984015,24984367-249844...   136   2e-32

>01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855
          Length = 152

 Score =  137 bits (331), Expect = 1e-32
 Identities = 73/135 (54%), Positives = 85/135 (62%)
 Frame = -2

Query: 512 LRLRGKVVKGEHGXRVRKIXNXXHFRRPKTFEXXXXXXXXXXXXXXRNXMDAYNIIKFPX 333
           L++   V  G    + +KI     F RPKT +              RN +D Y I+K+P 
Sbjct: 18  LKVAKAVKSGSIKRKSKKIRTSVTFHRPKTLKKARDPKYPRVSAPGRNKLDQYQILKYPL 77

Query: 332 TFEAAMKKIEDNNXLVFIVHTSANKHHIKAAVKKLYDINVGKVNTXIRPDGKKKAYVRLX 153
           T E+AMKKIEDNN LVFIV   A+K  IKAAVKK+YDI   KVNT IRPDGKKKAYV+L 
Sbjct: 78  TTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLT 137

Query: 152 RDYDALDVAXXIGII 108
            DYDALDVA  IGII
Sbjct: 138 PDYDALDVANKIGII 152


>04_04_0407 -
           24983491-24983575,24983655-24984015,24984367-24984406,
           24984466-24984468
          Length = 162

 Score =  136 bits (328), Expect = 2e-32
 Identities = 74/131 (56%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
 Frame = -2

Query: 497 KVVK-GEHGXRVRKIXNXXHFRRPKTFEXXXXXXXXXXXXXXRNXMDAYNIIKFPXTFEA 321
           K VK G      +KI     F RPKT +              RN +D Y I+K+P T E+
Sbjct: 32  KAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVSTPGRNKLDQYQILKYPLTTES 91

Query: 320 AMKKIEDNNXLVFIVHTSANKHHIKAAVKKLYDINVGKVNTXIRPDGKKKAYVRLXRDYD 141
           AMKKIEDNN LVFIV   A+K  IKAAVKK+YDI   KVNT IRPDGKKKAYV+L  DYD
Sbjct: 92  AMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYD 151

Query: 140 ALDVAXXIGII 108
           ALDVA  IGII
Sbjct: 152 ALDVANKIGII 162


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,613,853
Number of Sequences: 37544
Number of extensions: 242618
Number of successful extensions: 373
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)