Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_C21
         (786 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...   172   5e-43
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...   172   5e-43
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...   170   2e-42
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...   165   5e-41
BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p pro...    46   4e-05

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score =  172 bits (418), Expect = 5e-43
 Identities = 89/169 (52%), Positives = 107/169 (63%)
 Frame = -2

Query: 614 KASXFSKLKVAPEPQKXLGLRGPKKSSETCXLXHLRLRGKVVKGEHGXRVRKIXNXXHFR 435
           KA   +K K   +P      +G  K+     L   +++ K++KG  G R RKI    HFR
Sbjct: 102 KARAAAKAKKGVKPVTKPA-KGTAKAKAVALLNAKKVQKKIIKGAFGTRARKIRTNVHFR 160

Query: 434 RPKTFEXXXXXXXXXXXXXXRNXMDAYNIIKFPXTFEAAMKKIEDNNXLVFIVHTSANKH 255
           RP T +              RN MDAYNIIK+P T EAAMKKIEDNN LVF+ H  ANK+
Sbjct: 161 RPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRANKN 220

Query: 254 HIKAAVKKLYDINVGKVNTXIRPDGKKKAYVRLXRDYDALDVAXXIGII 108
           H++AAV+KLYDI V KVN  IRPDG+KKAYVRL RDYDALD+A  IGII
Sbjct: 221 HVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 269


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score =  172 bits (418), Expect = 5e-43
 Identities = 89/169 (52%), Positives = 107/169 (63%)
 Frame = -2

Query: 614 KASXFSKLKVAPEPQKXLGLRGPKKSSETCXLXHLRLRGKVVKGEHGXRVRKIXNXXHFR 435
           KA   +K K   +P      +G  K+     L   +++ K++KG  G R RKI    HFR
Sbjct: 110 KARAAAKAKKGVKPVTKPA-KGTAKAKAVALLNAKKVQKKIIKGAFGTRARKIRTNVHFR 168

Query: 434 RPKTFEXXXXXXXXXXXXXXRNXMDAYNIIKFPXTFEAAMKKIEDNNXLVFIVHTSANKH 255
           RP T +              RN MDAYNIIK+P T EAAMKKIEDNN LVF+ H  ANK+
Sbjct: 169 RPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRANKN 228

Query: 254 HIKAAVKKLYDINVGKVNTXIRPDGKKKAYVRLXRDYDALDVAXXIGII 108
           H++AAV+KLYDI V KVN  IRPDG+KKAYVRL RDYDALD+A  IGII
Sbjct: 229 HVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 277


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score =  170 bits (414), Expect = 2e-42
 Identities = 89/169 (52%), Positives = 106/169 (62%)
 Frame = -2

Query: 614 KASXFSKLKVAPEPQKXLGLRGPKKSSETCXLXHLRLRGKVVKGEHGXRVRKIXNXXHFR 435
           KA   +K K   +P      +G  K+     L   +++ K++KG  G R RKI    HFR
Sbjct: 110 KARAAAKAKKGVKPVTKPA-KGTAKAKAVALLNAKKVQKKIIKGAFGTRARKIRANVHFR 168

Query: 434 RPKTFEXXXXXXXXXXXXXXRNXMDAYNIIKFPXTFEAAMKKIEDNNXLVFIVHTSANKH 255
           RP T +              RN MDAYNIIK+P T EAAMKKIEDNN LVF+ H  ANK 
Sbjct: 169 RPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRANKS 228

Query: 254 HIKAAVKKLYDINVGKVNTXIRPDGKKKAYVRLXRDYDALDVAXXIGII 108
           H++AAV+KLYDI V KVN  IRPDG+KKAYVRL RDYDALD+A  IGII
Sbjct: 229 HVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 277


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score =  165 bits (402), Expect = 5e-41
 Identities = 88/169 (52%), Positives = 106/169 (62%)
 Frame = -2

Query: 614 KASXFSKLKVAPEPQKXLGLRGPKKSSETCXLXHLRLRGKVVKGEHGXRVRKIXNXXHFR 435
           KA   +K K   +P      +G  K+     L   +++ K++K   G R RKI    HFR
Sbjct: 103 KARAAAKAKKGVKPVTKPA-KGTAKAKAVALLNAKKVQKKIIKA-FGTRARKIRTNVHFR 160

Query: 434 RPKTFEXXXXXXXXXXXXXXRNXMDAYNIIKFPXTFEAAMKKIEDNNXLVFIVHTSANKH 255
           RP T +              RN MDAYNIIK+P T EAAMKKIEDNN LVF+ H  ANK+
Sbjct: 161 RPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRANKN 220

Query: 254 HIKAAVKKLYDINVGKVNTXIRPDGKKKAYVRLXRDYDALDVAXXIGII 108
           H++AAV+KLYDI V KVN  IRPDG+KKAYVRL RDYDALD+A  IGII
Sbjct: 221 HVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 269


>BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p
           protein.
          Length = 290

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
 Frame = -1

Query: 399 VPKEVXA*EKXHGCLQHH*IPXHV*SSNEED*R*QXLGXYCPH-KCKQAPYQGC-SQETL 226
           VP+E+ A ++ HG +QHH +P      +EED   Q  G   PH   +Q   + C S + L
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPG--LPHTPARQQEPRACRSAQAL 220

Query: 225 *YKCW*SQHXHQA*W*EESVXXXXXXXXRIGRCXXNWHHINCSI 94
            ++    +  H A W EE +        R G C  + HHI+ +I
Sbjct: 221 RHQGGQGERAHPARWPEEGLCAPGARLRRPGHCQQDRHHISAAI 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,909,694
Number of Sequences: 53049
Number of extensions: 401251
Number of successful extensions: 525
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)