Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_C16
         (795 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0734 + 27648661-27649596                                         32   0.60 
02_05_0202 + 26708049-26709074                                         30   2.4  

>04_04_0734 + 27648661-27649596
          Length = 311

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = -1

Query: 477 GHRAXXTRRGXGGXXXPPXXPXPRXAT 397
           GHRA   R G GG   PP  P P  AT
Sbjct: 191 GHRASHMRGGRGGCCAPPPNPPPSPAT 217


>02_05_0202 + 26708049-26709074
          Length = 341

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 477 GHRAXXTRRGXGGXXXPPXXPXPR 406
           GHRA   R G GG   PP  P P+
Sbjct: 215 GHRASHVRGGRGGCCAPPVAPPPQ 238


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,584,093
Number of Sequences: 37544
Number of extensions: 152667
Number of successful extensions: 270
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)