Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_C16
         (795 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.                31   3.6  
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.      31   3.6  
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ...    31   3.6  
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-...    31   3.6  
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-...    31   3.6  
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-...    31   3.6  
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage...    31   3.6  
AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3...    30   8.4  
AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha...    30   8.4  

>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
          Length = 1806

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -3

Query: 550  GXXGXPXPXEPPGXRGVXXFMXXXRAQGXXXPAGXGXXXXPAG 422
            G  G P P  PPG +G+        A+G   P G      PAG
Sbjct: 982  GERGYPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1024


>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
          Length = 1690

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -3

Query: 550 GXXGXPXPXEPPGXRGVXXFMXXXRAQGXXXPAGXGXXXXPAG 422
           G  G P P  PPG +G+        A+G   P G      PAG
Sbjct: 866 GERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 908


>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
            protein.
          Length = 1806

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -3

Query: 550  GXXGXPXPXEPPGXRGVXXFMXXXRAQGXXXPAGXGXXXXPAG 422
            G  G P P  PPG +G+        A+G   P G      PAG
Sbjct: 982  GERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1024


>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
            protein.
          Length = 1767

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -3

Query: 550  GXXGXPXPXEPPGXRGVXXFMXXXRAQGXXXPAGXGXXXXPAG 422
            G  G P P  PPG +G+        A+G   P G      PAG
Sbjct: 943  GERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 985


>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
            isoform B protein.
          Length = 1818

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -3

Query: 550  GXXGXPXPXEPPGXRGVXXFMXXXRAQGXXXPAGXGXXXXPAG 422
            G  G P P  PPG +G+        A+G   P G      PAG
Sbjct: 994  GERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1036


>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
            isoform A protein.
          Length = 1806

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -3

Query: 550  GXXGXPXPXEPPGXRGVXXFMXXXRAQGXXXPAGXGXXXXPAG 422
            G  G P P  PPG +G+        A+G   P G      PAG
Sbjct: 982  GERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1024


>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
           isoform C preproprotein variant protein.
          Length = 1017

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -3

Query: 550 GXXGXPXPXEPPGXRGVXXFMXXXRAQGXXXPAGXGXXXXPAG 422
           G  G P P  PPG +G+        A+G   P G      PAG
Sbjct: 193 GERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 235


>AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3
            chain protein.
          Length = 1745

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -3

Query: 550  GXXGXPXPXEPPGXRGVXXFMXXXRAQGXXXPAGXGXXXXPAG 422
            G  G P P  PPG +G+        A+G   P G      PAG
Sbjct: 932  GERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEGPAG 974


>AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha 3
           preproprotein variant protein.
          Length = 1658

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -3

Query: 550 GXXGXPXPXEPPGXRGVXXFMXXXRAQGXXXPAGXGXXXXPAG 422
           G  G P P  PPG +G+        A+G   P G      PAG
Sbjct: 845 GERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEGPAG 887


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,560,129
Number of Sequences: 237096
Number of extensions: 937773
Number of successful extensions: 6223
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5794
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)