Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_T7_C14
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81525-6|CAB82206.2|  346|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U41011-8|AAA82291.2|  321|Caenorhabditis elegans Collagen protei...    25   3.1  
U23172-13|ABH03527.1|  282|Caenorhabditis elegans Hypothetical p...    29   4.3  
U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical p...    29   4.3  
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    28   7.5  
Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical ...    27   9.9  
AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical ...    27   9.9  

>Z81525-6|CAB82206.2|  346|Caenorhabditis elegans Hypothetical
           protein F33A8.9 protein.
          Length = 346

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/50 (32%), Positives = 19/50 (38%)
 Frame = +3

Query: 225 PXNRGPXFXPXXWGXEXIXFXXGPPXPPGXXXPXXXFXGGGGKKKXXXXP 374
           P  +GP   P   G +      GPP PPG   P     GG G +     P
Sbjct: 213 PGPKGPRGTPGPTGPKNFYITSGPPGPPGPPGPPGN-PGGIGPRGPPGDP 261


>U41011-8|AAA82291.2|  321|Caenorhabditis elegans Collagen protein
           114 protein.
          Length = 321

 Score = 24.6 bits (51), Expect(2) = 3.1
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = +3

Query: 291 GPPXPPGXXXPXXXFXGGGGKKKXXXXPPXWXGG 392
           GPP PPG   P      GG K +     P    G
Sbjct: 250 GPPGPPGMAGPDGIPGMGGAKGQNGPDGPPGASG 283



 Score = 23.0 bits (47), Expect(2) = 3.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 222 SPXNRGPXFXPXXWGXEXIXFXXGPPXPPG 311
           +P ++GP   P   G +      GP  PPG
Sbjct: 182 APGDKGPAGQPGRNGPDGPNGEPGPKGPPG 211


>U23172-13|ABH03527.1|  282|Caenorhabditis elegans Hypothetical
           protein F25B5.7c protein.
          Length = 282

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 22/74 (29%), Positives = 23/74 (31%)
 Frame = -2

Query: 514 PPPXXGGGGXXXXXKKXXXXXXXXXXXGGXXKXKXXXFXXXPPXHXGGXXXXFFFPPPPX 335
           PPP  GGGG     +            GG            PP H G        PPP  
Sbjct: 154 PPPLMGGGGDP---RGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGG-----PPPGQ 205

Query: 334 XXXXGXXXPGGXGG 293
               G   PGG GG
Sbjct: 206 GGPGGPGGPGGPGG 219



 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
 Frame = -2

Query: 346 PPPXXXXXGXXX--PGGXGGPXKXQIXSFPQXXGXXXGPRFXGEKNPPP 206
           PPP     G     PGG GGP        P   G   GP   G    PP
Sbjct: 154 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPP 202


>U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical
           protein F25B5.7a protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 22/74 (29%), Positives = 23/74 (31%)
 Frame = -2

Query: 514 PPPXXGGGGXXXXXKKXXXXXXXXXXXGGXXKXKXXXFXXXPPXHXGGXXXXFFFPPPPX 335
           PPP  GGGG     +            GG            PP H G        PPP  
Sbjct: 434 PPPLMGGGGDP---RGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGG-----PPPGQ 485

Query: 334 XXXXGXXXPGGXGG 293
               G   PGG GG
Sbjct: 486 GGPGGPGGPGGPGG 499



 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
 Frame = -2

Query: 346 PPPXXXXXGXXX--PGGXGGPXKXQIXSFPQXXGXXXGPRFXGEKNPPP 206
           PPP     G     PGG GGP        P   G   GP   G    PP
Sbjct: 434 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPP 482


>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -2

Query: 349  PPPPXXXXXGXXXPGGXGGPXKXQIXSFPQXXG 251
            PPP          PGG GGP       FPQ  G
Sbjct: 1410 PPPHIMQRMMQQHPGGPGGPRLIMPGQFPQLQG 1442


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -2

Query: 349  PPPPXXXXXGXXXPGGXGGPXKXQIXSFPQXXG 251
            PPP          PGG GGP       FPQ  G
Sbjct: 1410 PPPHIMQRMMQQHPGGPGGPRLIMPGQFPQLQG 1442


>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = -2

Query: 349 PPPPXXXXXGXXXPGGXGGPXKXQIXSFPQXXGXXXGPRFXGEKNPPP 206
           PPPP     G   P    GP        P   G   GP   G   PPP
Sbjct: 367 PPPPVSSAPGNFAPPPQSGP-PGAFAPPPSAFGAPQGPGGPGGYGPPP 413


>Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical
           protein B0035.1b protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = -2

Query: 343 PPXXXXXGXXXPGGXGGPXKXQIXSFPQ-XXGXXXGPRFXGEKNPPPF 203
           PP     G   PGG   P   Q   F Q   G   GP   G    PP+
Sbjct: 185 PPPRMPIGHGPPGGPPMPGPPQRSRFDQPDGGDRWGPPMRGVPRTPPY 232


>Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical
           protein B0035.1a protein.
          Length = 298

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = -2

Query: 343 PPXXXXXGXXXPGGXGGPXKXQIXSFPQ-XXGXXXGPRFXGEKNPPPF 203
           PP     G   PGG   P   Q   F Q   G   GP   G    PP+
Sbjct: 185 PPPRMPIGHGPPGGPPMPGPPQRSRFDQPDGGDRWGPPMRGVPRTPPY 232


>AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical
           protein R148.5b protein.
          Length = 505

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -3

Query: 390 PXXTXGGXXGXFFSPPPPXXXXGXXXPPXGGXV 292
           P    GG    FF PPPP        P  GG +
Sbjct: 341 PMMFRGGPYPPFFPPPPPHFMRPSSPPTDGGPI 373


>AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical
           protein R148.5a protein.
          Length = 528

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -3

Query: 390 PXXTXGGXXGXFFSPPPPXXXXGXXXPPXGGXV 292
           P    GG    FF PPPP        P  GG +
Sbjct: 341 PMMFRGGPYPPFFPPPPPHFMRPSSPPTDGGPI 373


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,778,795
Number of Sequences: 27780
Number of extensions: 169497
Number of successful extensions: 687
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)